SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000002146 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000002146
Domain Number 1 Region: 66-155
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 7.09e-20
Family Hypoxia-inducible factor Hif2a, C-terminal domain 0.00057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000002146   Gene: ENSSSCG00000001964   Transcript: ENSSSCT00000002197
Sequence length 650
Comment pep:known_by_projection chromosome:Sscrofa10.2:7:70790412:70970931:-1 gene:ENSSSCG00000001964 transcript:ENSSSCT00000002197 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINEV
RIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDLL
NKGQCVTKYYRWMQKNGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKDTPMDIA
QLPHLPEKTSESSETSDSESDSKDTSEDNENSKSDEKGNQSENSEDPEPDRKKSGNTCDN
DMNCNDDGHSSSNPDSRDSDDSFEHSDFENPKAAEDGGGGFGALGPMQIKVERYVESESD
LRLQNCESLSSDSAKDSDSAGEGGAQASSKHQKRKKRRKRQKGGSASRRRLSSTSSPGGL
DTGLVEPPRLLSSPNSASVLKIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPP
SSEHFPSPPGGTGGGGLHVAIPDSVLTPPGADGTAAARGKTQFSSSAPAALAPVASDPLS
PPLSASPRDKHPSAPGASNSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRV
YTTGTIRYAPAEVTLAMQGNLLPNAHAVNFVDVNSPGFGLDPKTPMEMLYHHVHRLNMSG
PFGGAVSAASLTQMPAGNVFTTAEGLFSTLPFPVYSNGIHAAQTLERKED
Download sequence
Identical sequences ENSSSCP00000002146 ENSSSCP00000002146

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]