SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000005160 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000005160
Domain Number 1 Region: 39-463
Classification Level Classification E-value
Superfamily Ras GEF 3.14e-102
Family Ras GEF 0.00043
Further Details:      
 
Domain Number 2 Region: 524-592
Classification Level Classification E-value
Superfamily Cysteine-rich domain 3.29e-20
Family Protein kinase cysteine-rich domain (cys2, phorbol-binding domain) 0.0011
Further Details:      
 
Domain Number 3 Region: 458-529
Classification Level Classification E-value
Superfamily EF-hand 0.00000000000658
Family Calmodulin-like 0.033
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000005160
Domain Number - Region: 747-782
Classification Level Classification E-value
Superfamily Mitotic arrest deficient-like 1, Mad1 0.0745
Family Mitotic arrest deficient-like 1, Mad1 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000005160   Gene: ENSSSCG00000004791   Transcript: ENSSSCT00000005290
Sequence length 797
Comment pep:known_by_projection chromosome:Sscrofa10.2:1:148187752:148270286:1 gene:ENSSSCG00000004791 transcript:ENSSSCT00000005290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGTLGKTREAPRKPSHGSRAAPKTRLEAKPASSPCPSHPSLAQITQFRMMVSLGHLAKGA
SLDDLIDSCVQSFDADGNLCRSNQLLQVMLTMHRILISSAELLQKVITLYPDALAKNSPG
LCLKICYFVRYWITEFWIMFKMDTSLAHTMEEFQELVKANGEELHSRLIDTTQINSRDWS
RKLTQRIKSNTSKKRKVSLLFDHLEPEELSEHLTYLEFKSFRRISFSDYQNYLVNSCVKE
NPTMERSIALCNGISQWVQLMVLSRPTPQLRAEVFIKFIQVAQKLHQLQNFNTLMAVIGG
LCHSSISRLKETSSHVPHEINKVLGEMTELLSSCRNYDNYRRAYGECTHFKIPILGVHLK
DLISLYEAMPDYLEEGKVNVHKLLALYNHINELVQLQEVAPPLEANKDLVHLLTLSLDLY
YTEDEIYELSYAREPRNHKAPPLTPSKPPVVVDWASGVSPKPDPKTISKHVQRMVDSVFK
NYDHDQDGYISQEEFEKIAASFPFSFCVMDKDREGLISRDEITAYFMRASSIYSKLGLGF
PHNFQETTYLKPTFCDNCAGFLWGVIKQGYRCKDCGMNCHKQCKDLVVFECKKRAKNSTA
PTENSTSVGPTPNLCSLGAKDLLHAPEEGPFTFPNGEAVEHSEESKDRTIMLMGVSSQKI
SVRLKRTVAHKATQTESLSWLSSEGPSGHFVLSSPRKTAQDTLYVLPSPTSPCPSPVLVR
KRAFVKWENKESLIKSKEELRHLRLPTYQELEQEINTLKADNNALKIQLKYAQKKIETLQ
LARSNHVLAQMEHGDCS
Download sequence
Identical sequences ENSSSCP00000005160 9823.ENSSSCP00000005160 ENSSSCP00000005160

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]