SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000006216 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000006216
Domain Number 1 Region: 3-309
Classification Level Classification E-value
Superfamily Family A G protein-coupled receptor-like 1.46e-75
Family Rhodopsin-like 0.0093
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000006216   Gene: ENSSSCG00000005805   Transcript: ENSSSCT00000006381
Sequence length 315
Comment pep:novel chromosome:Sscrofa10.2:1:312412169:312413113:1 gene:ENSSSCG00000005805 transcript:ENSSSCT00000006381 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VDKYNLTLLNKFILMGIMDIPKLKAPLFGLFLIVYLISVMGNLGLSILIKIDHRLQTLMY
FFLRHLAFTDFGYSTAVGPKMLANFAVDKPTISYHWCATQLMFFSMFITSEIFILSAMAY
DRYMAICHPLLYMGLTSPRLCQVLVTIPYLYSLFLSLLTIIKIFCSSFCGYYVIRHFYCD
SLPLIALLCSDTQEIKLIILIFSAFNLLSSVLIVLGSYIFILATILRMNSAERRLKAFST
CGSHLTVIVIFYGTLFFMYVKPNSSDSFDVDQVASLFYTLVIPMLNPMIYSWRNKEVKNA
LPRAWRMCANILFKT
Download sequence
Identical sequences ENSSSCP00000006216 ENSSSCP00000006216 9823.ENSSSCP00000006216

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]