SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000008985 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000008985
Domain Number 1 Region: 6-162
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.16e-33
Family Laminin G-like module 0.0034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000008985   Gene: ENSSSCG00000008419   Transcript: ENSSSCT00000009219
Sequence length 163
Comment pep:novel chromosome:Sscrofa10.2:3:95921220:95924820:1 gene:ENSSSCG00000008419 transcript:ENSSSCT00000009219 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKN
GAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTT
TGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKE
Download sequence
Identical sequences 9823.ENSSSCP00000008985 ENSSSCP00000008985 ENSSSCP00000008985

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]