SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000013606 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000013606
Domain Number 1 Region: 3-77
Classification Level Classification E-value
Superfamily DNA-binding domain 1.63e-24
Family Methyl-CpG-binding domain, MBD 0.0000167
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000013606   Gene: ENSSSCG00000012796   Transcript: ENSSSCT00000013989
Sequence length 102
Comment pep:known_by_projection chromosome:Sscrofa10.2:X:142301473:142303183:-1 gene:ENSSSCG00000012796 transcript:ENSSSCT00000013989 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
APAVPEASASPKQRRSIIRDRGPMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGK
AFRSKVELIAYFEKLQELAEVGDAPKGVAPRDPRQQRPRACR
Download sequence
Identical sequences ENSSSCP00000013606

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]