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Domain assignment for ENSSSCP00000013794 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000013794
Domain Number 1 Region: 268-418
Classification Level Classification E-value
Superfamily Restriction endonuclease-like 6.97e-32
Family XPF/Rad1/Mus81 nuclease 0.002
Further Details:      
 
Domain Number 2 Region: 9-87
Classification Level Classification E-value
Superfamily DNA polymerase beta, N-terminal domain-like 2.22e-17
Family DNA polymerase beta, N-terminal domain-like 0.0051
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000013794
Domain Number - Region: 182-218
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.00808
Family MarR-like transcriptional regulators 0.066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000013794   Gene: ENSSSCG00000012973   Transcript: ENSSSCT00000014180
Sequence length 552
Comment pep:known_by_projection chromosome:Sscrofa10.2:2:5565606:5572868:-1 gene:ENSSSCG00000012973 transcript:ENSSSCT00000014180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAPVRLGRKRPLPLCPNPLFVRWLTEWRDEAASRGRRTQFVFQKALRSLRRYPLPLRSG
KEAKILQHFGDGLCRMLDQRLQQHRTSGGDHAPGSPSGRKSPARERPPAEVQDSSMPVPT
QRKAGGPGSYWPARHSGARAVLLLLYREHLNPSGHGFLTKEELLQGCAQKAPRVAPGSAQ
PWPALRSLLHRNLVFRTHRPARYSLTPEGLELAQRLAESEGLSSLNVGTAPEESPGEEPE
VPGAASAELGASEGSDEQPALELGPGEYRVLLCVDIGETRGAGHRPELLRELQRLRVTHT
VRKLHVGDFVWVAQETSPRDPARPRELVLDHIVERKRLDDLCRSIIDGRFREQKFRLKRC
GLGHPVYLVEEHGSGQNLSLPESTLLQAVTNTQVIDGFFVKRTADIKESAAYLALLTRGL
QRLYQGHTLRSRPWGPPEDPVSGAGPPPNPLCSLLTFNEFNTGAMKNKAQSVREVFARQL
MQVRGVSGEKAAALVDRYSTPASLLAAYDACATSKEQEMLLSTIKCGPLQRNLGPALSRT
LSQLYCTSGPLT
Download sequence
Identical sequences A0A287AWM6
ENSSSCP00000013794 ENSSSCP00000013794 XP_003122574.2.46622

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