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Domain assignment for ENSSSCP00000018239 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000018239
Domain Number 1 Region: 428-614
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.89e-36
Family SPRY domain 0.0035
Further Details:      
 
Domain Number 2 Region: 57-134
Classification Level Classification E-value
Superfamily RING/U-box 2.12e-18
Family RING finger domain, C3HC4 0.013
Further Details:      
 
Domain Number 3 Region: 193-258
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.0000000000000382
Family B-box zinc-binding domain 0.00047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000018239   Gene: ENSSSCG00000017216   Transcript: ENSSSCT00000018741
Sequence length 620
Comment pep:known chromosome:Sscrofa10.2:12:6227159:6232482:-1 gene:ENSSSCG00000017216 transcript:ENSSSCT00000018741 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
AKQQPKGKRAAKPPVSGLLDMQRVSRPVQDHIPAPQPSPQPSRRPQGQFLMNHNHLQMFE
DQVLCPICLEVFRHPVTTACGHNFCMTCLQGFWDHQATLGEALYCPQCRESIPSRPRLCK
NVTLEEMVACLTQAKGQALGSSPNLAGPRDVPCDFCSPQKLKSVKSCLQCMASLCEKHLR
SHFEDQVFQGHQLLEPVWDLKSRLCRKHRKLRRLYCRTEGSCVCGACLLEEHKNHDTIPL
EEERARKEVEVRKVQANVENQMLIVTSDSQKHRGQMAFLSKLTQTTRDEVNTCFSEIIQE
IKQLQMKVLDFVEKEEAAALGKLGSSIQQSHNRLLKLEGDSIWLRTLLSSRSDQQFLQDF
SRLKHFPACLEPLMGTSCEEKQSFLQLPETLAELRTRLMDVGLSFINQILLKGIKMNAYE
VLPPAVDRKTLLQCYCNLSFDPTTASEELFLFKETHSVLNLGILLEPFAAGGPFPGFKQW
PQVLCSRGLAAGRHYWEAEVSNSWVCLGVTYRRSPPLSGRPRRNIVYLLGRNPYSWCLEW
DSLKFSVWHNNTQTVLHGGYHRTLGVALDCGAGCLSFYGVAVAGGVSLIYRFLAAFLEPL
YPAVMVSSGASVTLKQHPES
Download sequence
Identical sequences ENSSSCP00000018239

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