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Domain assignment for ENSSSCP00000019934 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000019934
Domain Number 1 Region: 5-100
Classification Level Classification E-value
Superfamily RING/U-box 3.33e-37
Family RING finger domain, C3HC4 0.00000612
Further Details:      
 
Domain Number 2 Region: 1649-1754
Classification Level Classification E-value
Superfamily BRCT domain 1.57e-26
Family BRCT domain 0.00000373
Further Details:      
 
Domain Number 3 Region: 1757-1855
Classification Level Classification E-value
Superfamily BRCT domain 8.24e-23
Family BRCT domain 0.0000056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000019934   Gene: ENSSSCG00000022101   Transcript: ENSSSCT00000025436
Sequence length 1865
Comment pep:known chromosome:Sscrofa10.2:12:20029801:20091791:-1 gene:ENSSSCG00000022101 transcript:ENSSSCT00000025436 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LSVDHIEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCP
LCKNDITKRSLQESTRFSQLVEELLKIIHAFELDTGLQFANNYNFSKKTENNSPEHLKEE
VSIIQSMGYRNRAKRLRQSDPEDPTLQETSLSAQLSNLGIVKPLRTQQQIQPQNKSVYIE
LGSDSSEDTVNKANYCSGGDHGLLETTPQGAKAEAKKDACQFSEKDITNTEHHHSSNKDL
TATEKHATEKHPEKYEGISVSNLHVEPCGTDTHASSLQHENSSLLLTKDRMNVEKAEFCN
KSKQPVLAKSQQSRWAESKGTCNDRQTPNTEKKVVLNTDLLYGRNELNKQKPACSDSPRD
SQDVPWITLNSSIQKVNEWFSRSDEMLTSDDSQDRRSESNTGVAGAAEVPNEADGHLGSS
EKIDLMASDPHGALIRERERGHSKPAESNIEDKIFGKTYRRKASLPNLSHVIEDLILGAS
AVEPQITQERPLTNKLKRKRRGTSGLDPEDFIKRADSAVVPKTPEKTIEGTDETEQNGQG
MNITSKGHENETKSGNVQKEKNVNPTASLGKEPAFRARAEPISSSISNMELELNIHGSKA
PKNRLRRKSSTRQIHALELVVNRNPSPPSHTELQIDSCSSSEEMKKRNSDQVPVRHSKKL
HLRGDKEPTTGAKKNNRPHEQVNKRPISDAFPELNLTNVPVSITNCSNSNKLQESVSPNL
QREENLGTIQVSNSNKDPKDVMLSGGKGFQIERSVENTSISLVPDTDYGTQDSISLLETD
TLGKAKTTPNQHVRLCAATENPKELSLGCSKGVRNDTGDFKDPLAHDVNHTQEASIEVEE
NELDTQYLQSMFKVSKRQTFALFSNPANPEKECTTVHAHSKSLREQSPKVTHEGGQKDEN
QGKSESKVKHGQSVHTTVDFLVVGQKDKKPSDFAKCGAKGVTGLYQTSQFRGHKTEFINA
NKPGISQNPYVIPSLSPIRSSVKTICKKNLSEEKFEEPKMSPERTMGNESIIPNTESTVS
QNNIQERTFKEGSSGSPNEVGSSTNEVGSSINEVGSSGENVRAEPGRNRGPKLSAMLRLG
LMQPEVYKQSLPVSNCNHTEIKRQGENEGIFQAVNADFSPYLISDNPEQPMGSSHASQIC
SETPDDLLNDDKIKENLNFAESDVKERSAVFSKSAQEGEFKRSPSPLAHRRLAQGHQRWA
RKLESSEESGSSEDEELPCFQHLLFGKVTNTPSPSTRHNAVAAEGLSKEAGESLVSLKNS
LNDCSDQVTSAKASQEHHLSEDVRCSGSLFSSQCSALEDSAANTNSQDPFLMFDPPSKQV
EHQSENQEVLSDKELVSEDDERETGLEEDNCQEEQIVDSDLGETAFEYESETSFSEDCSG
LSSQSAILTTQQRDTMQDNLLKLQQEMAELEAVLEQHGSQPSHSSPSLIADSCAPEDLLN
PEQNTSEKVKAVLTSEKSSDYPITQNPESLSADKFQVSLDRSTSKNKESGMERSSTSKSQ
LSDSRWYMHSPSRSLQNRSCPSQEELIPVIDLEEQQLTTSEAQDSVKQSYLPRQDLEGTP
YLKSGISLFSDDPESDPSENRAPESAHVFSTPLSTSALKLPQFQVKESAKSPAAAHTTNT
AGYNVRQESMSRKKPEVISSTKTNSRRISIVASGLTPKEYTLVQKFARKHYITLTNLITE
ETTHVIMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKEGKMLDEHDFEVRGDVVN
GRNHRGPKRARESQDRKIFKGLEICCCGPFTNMPTDQLEWMVLLCGASVVKDPSSFTFRQ
GTRPVVVVQPDAWPEDSGFHVIGQMCEAPVVTREWVLDSVALYQCQELDTYLIPQVPQSC
CRPCT
Download sequence
Identical sequences ENSSSCP00000019934 ENSSSCP00000019934

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