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Domain assignment for ENSSSCP00000020334 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000020334
Domain Number 1 Region: 72-112
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000485
Family EGF-type module 0.015
Further Details:      
 
Domain Number 2 Region: 157-218
Classification Level Classification E-value
Superfamily TSP type-3 repeat 0.000000209
Family TSP type-3 repeat 0.00088
Further Details:      
 
Domain Number 3 Region: 18-58
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000209
Family EGF-type module 0.022
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000020334
Domain Number - Region: 122-164
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00257
Family EGF-type module 0.077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000020334   Gene: ENSSSCG00000024986   Transcript: ENSSSCT00000029318
Sequence length 227
Comment pep:known chromosome:Sscrofa10.2:2:90762307:90775311:-1 gene:ENSSSCG00000024986 transcript:ENSSSCT00000029318 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CTDTRDGFQCGPCPEGYTGNGVTCSDVDECRYHPCYPGVRCVNLAPGFRCDACPVGFTGP
TVQGVGINFAKTNKQVCTDIDECRNGACVLNSICVNTLGSYRCGPCKPGYIGDQMRGCKM
ERNCRNPELNPCSVNAQCIEERQGDVTCVCGVGWAGDGYICGKDVDIDSYPDEELPCSAR
NCKKDNCKYVPNSGQEDADRDGIGDACDEDADGDGILNEQVGSCFAG
Download sequence
Identical sequences ENSSSCP00000020334 ENSSSCP00000020334

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