SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000020506 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000020506
Domain Number 1 Region: 73-259
Classification Level Classification E-value
Superfamily Metalloproteases ("zincins"), catalytic domain 2.42e-50
Family Astacin 0.00019
Further Details:      
 
Domain Number 2 Region: 430-603
Classification Level Classification E-value
Superfamily TRAF domain-like 6.54e-38
Family MATH domain 0.00081
Further Details:      
 
Domain Number 3 Region: 267-431
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.11e-29
Family MAM domain 0.0048
Further Details:      
 
Domain Number 4 Region: 675-716
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000018
Family EGF-type module 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000020506   Gene: ENSSSCG00000001724   Transcript: ENSSSCT00000022332
Sequence length 748
Comment pep:known_by_projection chromosome:Sscrofa10.2:7:48248958:48285544:1 gene:ENSSSCG00000001724 transcript:ENSSSCT00000022332 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MIWTRSPCILSFILFFAHIAAVSIKHLSKGNVHDGDFDEQKDITEINLDAGLDLFQGDIL
LQNSRNGLRDPNTRWKFPIPYILANNLALNAKGAILYAFEMFRLKSCVDFKPYEGESSYI
IFQKFDGCWSEVGDQHVGQNLSIGQGCDYKAIIEHEILHALGFYHEQSRTDRDDYVNIWW
DEILPGYQHNFNTYDDNFITDLNTPYDYESLMHYGPFSFNKNDSVPTITTKIPEFNTIIG
QRLDFSEVDLERLNRMYNCTTTHTFLDHCAFEKANICGMIQGTRDDADWVHEDSAQPGQV
DHTLGGQCTGAGYFMHFDTSSGAVEEAALLESRILYPKRKQQCLQFFYKMTGSSSDRLVV
WVRRDDGTGNVRKLVKMKTFQGDFDQNWKIAHVPLREEKKFRYLFQGTKGDPQNSNGGIY
LDDVTLTETPCPTGVWTVRNFSQVLQDTVQGDKLQSPRFYSSEGYGLGLTLYPHGGMNSE
HSEYVGLAFHLCSGENDAVLEWPVENRQVIMTILDQEPDVRKRMSSSMVFTTSKSQTSAA
INGSVIWDRPSIVGSYHNSCDCFRTIDWGWSGVISHQMLKRKSFLKNDDLILFVDFEDIT
HLNQTEVDVKDSRLTPRGLILQGQEQQVSEEASRKASLEKALLESPAQGHSGRQKRSVDN
TGPLEDPTWPQYFRDPCDPNPCQNEGICVNVKGMASCRCVSSRAFFYTGERCQAMQVHGS
ILGLMLGGAASLILSFTIVSILHQRPRQ
Download sequence
Identical sequences ENSSSCP00000020506

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]