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Domain assignment for ENSSSCP00000021553 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000021553
Domain Number 1 Region: 33-499
Classification Level Classification E-value
Superfamily Sema domain 2.22e-167
Family Sema domain 0.00000000114
Further Details:      
 
Domain Number 2 Region: 501-550
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000000000131
Family Plexin repeat 0.0011
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000021553
Domain Number - Region: 561-613
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000228
Family I set domains 0.066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000021553   Gene: ENSSSCG00000024746   Transcript: ENSSSCT00000028512
Sequence length 617
Comment pep:novel chromosome:Sscrofa10.2:3:59557949:59564578:1 gene:ENSSSCG00000024746 transcript:ENSSSCT00000028512 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAPHWAFWLLAVGLWGLGIEAEVWWNLVPRKTVSSGELATVVRRFSQTGIQDFLTLTLTE
QTGLLYVGAREALFAFSVEALELQGVISWEAPAEKKAECIQKGKSNQTECFNFIRFLQPY
NTSHLYVCGTYAFQPKCTYIDMLTFTLERGEFEDGKGKCPYDPAKGHTGLLVDGELYSAT
FNNFLGTEPVILRNMGPHHAMKTEYLAFWLNEPHFVGSAYVPESVGSFTGDDDKVYFFFS
ERAVEYDCYAEQVVARVARVCKGDVGGARTLQRKWTTFLKARLVCSAPDWQLYFNQLQAL
HTLLDASWHNTTFFGVFRARWGDVDLSAVCEYQLEEIQRVFEGPYKEYHEQAQKWGRYTD
PVPSPRPGSCINNWHGRHGYTSSLELPDNTLNFIKKHPLMEEQVDPRWGRPLLVKKDTNF
THLVADRVVGLDGATYTVLFIGTGDGWVLKAVSLGPWVHLIEELQVFDQEPVESLVLSQS
KQKLLFAGSRSQLVQLPLADCVKYRSCADCVLARDPYCAWSVNTSRCVAVGGHSGSLLIQ
HVTVSDTSSICNFRGSKKAAVRLTPKNITVVAGTDLVLPCRLSSNLAHARWTFGGRDLPA
EQPGSFLYDARLQALVV
Download sequence
Identical sequences ENSSSCP00000021553 ENSSSCP00000021553

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