SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000023795 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000023795
Domain Number 1 Region: 5-195,224-379
Classification Level Classification E-value
Superfamily DPP6 N-terminal domain-like 7.45e-33
Family DPP6 N-terminal domain-like 0.028
Further Details:      
 
Domain Number 2 Region: 465-625
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.000000163
Family Cell cycle arrest protein BUB3 0.085
Further Details:      
 
Domain Number 3 Region: 853-951
Classification Level Classification E-value
Superfamily ARM repeat 0.0000748
Family MIF4G domain-like 0.089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000023795   Gene: ENSSSCG00000008604   Transcript: ENSSSCT00000031965
Sequence length 1175
Comment pep:known_by_projection chromosome:Sscrofa10.2:3:126240420:126295772:1 gene:ENSSSCG00000008604 transcript:ENSSSCT00000031965 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MFFYLSKKISIPNNVKLKCISWNKDQGFIACGGEDGLLKVLKLETQTDDAKLRGLAAPSN
LSMNQTLEGHSGSVQVVTWNEQYQKLTTSDQNGLIIVWMLCRVVKTGSWYEEMINNRNKS
VVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWGKDLKGIQLCHVAWSADSKILLFGMA
NGEIHIYDNQGNFIMKMKLNCLVNVTGAISIAGIHWYHGTEGYVEPDCPCLAICFDNGRC
QIMRHENDQNPVLVDTGMHVVSIQWNHTGSVLAVAGSQKASTQDKDANTVQFFTPFGEHL
GTLKVPGKQMSALSWEGGGLKIALAVDSFIYLANIRPDYKWGYCSNTVVYAYTRPDRPEY
CVIFWDTKNNEKYVKYVKSLLSITTCGDFCILATKADETHPQFVLVLCNSIGTPLDPKYI
DIVPLFVTMTKTHVIAASKEAFYTWQYRVAKKLTALEINQIMWSRKEGRERIYHVDDTPS
GSVDGVLDYSKAIQISILKNFCLITLSNPFFLVIRESGTIQRYSLPNVGLIQKYSLNCRA
YQLSLNCNSSRLAIIDISGVLTFFDLDARVTDSTGQQVIGELLNLERKDVWDMKWAKDNP
DLFAMMEKTRMYVFRNLDPEEPIQTSGYICNFEDLEIKSVLLDEILKNPEHPNKDYIINF
EIRSLRDSRALIEKVGIEDASQFIEDNPHPRLWRLLAEAALQKLDLPTAEQAFVRCKDYQ
GIKFVKCLGNLQSESMKQAEVAAYFGRFEEAERMYLNMDRRDLAIGLRLKLGDWFRVLQL
LKTGSGAADDSLLEQAHNAIGDYFADRQKWLNAVQYYVQGRNQERLAECYYMLEDYEGLE
NLANSLPENHKLLPEIAQMFVRVGMCEQAVMAFLKCNQPKAAVDTCVHLNQWNKAVELAK
NHSMKEIGSLLARYASHLLEKNKTLDAIELYRKANYFYDAAKLMFKIADEEAKKRTKPLR
VKKLYVLSALLIEQYHEQVKNAQRGKVTGKSSETTSALAGLLEEDVLSTTSRFTDNAWRG
AEAYHFFILAQRQLYEGYVDMALKTALHLKDYEDIIPAVEIYSLLALCACASRAFGTCSK
AFVKLESLETLSSDQKQQYEELALEIFTKYTPKDNRKSELDSLLEGGEGKLPTCVATGSP
ITEYQFWMCNVCKHCVLAQEISNYNFCPLCHSSVG
Download sequence
Identical sequences ENSSSCP00000023795

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]