SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000024002 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000024002
Domain Number 1 Region: 91-158
Classification Level Classification E-value
Superfamily FnI-like domain 0.000000000000488
Family VWC domain 0.038
Further Details:      
 
Domain Number 2 Region: 237-304
Classification Level Classification E-value
Superfamily FnI-like domain 0.00000000000454
Family VWC domain 0.0087
Further Details:      
 
Domain Number 3 Region: 12-79
Classification Level Classification E-value
Superfamily FnI-like domain 0.0000000000523
Family VWC domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000024002   Gene: ENSSSCG00000012576   Transcript: ENSSSCT00000027812
Sequence length 437
Comment pep:known_by_projection chromosome:Sscrofa10.2:X:104294847:104396474:1 gene:ENSSSCG00000012576 transcript:ENSSSCT00000027812 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
EGGNTDLKNSETYCVFQDKKYRVGERWHPYLEPYGLVYCVNCICSENGNVLCSRVRCPSL
HCLSPVHVPHLCCPRCPEDSLPPANNKVTSKSCEYNGTTYQHGELFMAEGLFQNRQPNQC
TQCSCSEGNVYCGLKTCPKLTCAFPVSVPDSCCRVCRETGDGELSWEHSDGDIFRQPANR
EARHSYHRSHYDPPPSRPAGSLPRFPGARSHRGALMDSQQASGTIVQIVINNKHKHGQVC
VSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQECKKIHCPNRYPCKYPQKIDGKCCK
VCPGKKAKEELPSQSLDSKGYFCGEETMPVYESVFMEDGETTRKIALETERPPQVEVHVW
TIRKGILQHFHIEKISKRMFEELHHFKLVTRTTLSQWKIFTEGEAQISQMCSSRVCRTEL
EDLVKVLYLERSEKGHC
Download sequence
Identical sequences ENSSSCP00000024002

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]