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Domain assignment for ENSSSCP00000024988 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000024988
Domain Number 1 Region: 280-449
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.74e-41
Family SPRY domain 0.00011
Further Details:      
 
Domain Number 2 Region: 7-74
Classification Level Classification E-value
Superfamily RING/U-box 6.82e-16
Family RING finger domain, C3HC4 0.028
Further Details:      
 
Domain Number 3 Region: 85-147
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.00000000168
Family B-box zinc-binding domain 0.0056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000024988   Gene: ENSSSCG00000023101   Transcript: ENSSSCT00000023107
Sequence length 451
Comment pep:novel chromosome:Sscrofa10.2:9:25588364:25593758:1 gene:ENSSSCG00000023101 transcript:ENSSSCT00000023107 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RIMGSKSFQNEFTCSLCDKYFIDPVTLGCGHSFCMPCLCLSWEEEAQHSPRCPVCKEKSH
QMNLKTNIVLMTRVFLARLTGPDDLPSPEEQTCETHMKPKNFYCEVTKDVLCLPCSKTKE
HVAHLHCSIGWTAEEYRQKLLKQMRCLWVKIQQNERNLRRETSKIRNWEDYVTLRKTTII
AEYWNICQFIDQKEKRYLQRLDEESKEIFQQLQESQYNMDLMGNLLRGLYEELKDLCHKP
DMQMIQKSNCFLPGRSEKLQLHVPQPIVPQLSSWPIAGLMDWLHQFQVYFASDKETVTRH
VPVFEDLQRWLSGPDRPGVDNTPTRLKYFLAWGAESFTSGQHYWEVNMAGCCNWAIGLCN
DSWAKKNDMALESEGIFLLFCIQENQQCSLFTSSPLTPQYVQRPLGQVGVFLDYEAGLVS
FIDVATSSLICSFLSCSFSSALKAFLCSGHP
Download sequence
Identical sequences ENSSSCP00000024988 ENSSSCP00000024616

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