SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000025212 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000025212
Domain Number 1 Region: 3-38
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.0000012
Family Flavin-binding PAS domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000025212   Gene: ENSSSCG00000030651   Transcript: ENSSSCT00000027426
Sequence length 85
Comment pep:novel chromosome:Sscrofa10.2:13:7189695:7244610:-1 gene:ENSSSCG00000030651 transcript:ENSSSCT00000027426 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
IVITVAGSPFWCLLDIVPIKNEKGDVVLFLASFKDITDTKVKITPEDKKEDKAKGRSRAG
THLDSARRRSRAVLYHISGHLQRRE
Download sequence
Identical sequences ENSSSCP00000025212 ENSSSCP00000025212

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]