SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSSCP00000027610 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSSCP00000027610
Domain Number 1 Region: 174-232
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 9.3e-18
Family PHD domain 0.0018
Further Details:      
 
Domain Number 2 Region: 100-152
Classification Level Classification E-value
Superfamily RING/U-box 0.000000000000153
Family RING finger domain, C3HC4 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000027610   Gene: ENSSSCG00000029723   Transcript: ENSSSCT00000024857
Sequence length 1643
Comment pep:known_by_projection chromosome:Sscrofa10.2:2:299390:333963:-1 gene:ENSSSCG00000029723 transcript:ENSSSCT00000024857 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDDDSLDELVDRNLGPAGHPSLSPADLASDAEGSSDEHSGGSEDDTGGEHSDESEDDDEG
DPEDSSGSEDSEDDGDDMDTLVAAADAQGKPEAGGAFSSDDDAESCPICLNAFRDQAVGT
PENCAHYFCLDCILEWSKNANSCPVDRTVFKCICIRAQLGGKILRKIPVENPRLGEHEEE
DPTFCEVCGRSDREDRLLLCDGCDAGYHMECLEPPLQEVPVDEWFCPECTASGAASAAAD
AGPVSEEEVSLLLTDVVPTTSRLRPHAGRTRAIARTRQSERVRATVNRNRISTARRVQHV
PRYLMSSLLDETIEAVATGLSTAVYQRPGTPRAPARRRRRTGRRKKVPGRKKSQSRPSAK
GKSCGTRLRRRQSRAKRRKGQKAKNEATARARIARRLYLQRPAHGACVPSVCKPADPSLG
LMRAEIGAASLSLFGDPYELDPFDSSEEVSASPASPLSAKRRILSRSALQSHQPVARPVS
MGLSRRSAPATAAQPEVDSDPVPDLLGSILSSQNLLMMSSADIVIHRDGSLSAKRAAPVS
FQRSAVGPSRGGAGAGSGAGLQPRGTQSEDRPQSLGATGPGRAALGAAPAPPTPTCVPAL
TSGAAVKLDSSVTPRSGQVQTLSSASRPSLRQDDGPQMNGEVRHSPPLRSTASKGSSSSS
DSPSGSSAPGQAQRPAPRRADVSELPRIPKSRRDDSRAAEAPAGGQHIEIPSSCISRLTG
REGPGRPGCGARVEGEPSSRAAREPSAASGGAPQPPAPLGPSRGKGVGSTFESFRINIPG
NTAHSSRVLSPGFCNTFRPVDSKAQRRDSPAPLFSVRKTKQLKSEIYDPFNPTGSDSSSA
SSSPEHLGSGLLPSEITRTISVDSPKAPALPPVRCVTSYTVQTGFGKEPQPPPGPPDVPE
LQSQEEPVGGRGAAAQAQRLSPQEPWGGEDQPPRSSFFGSEGRTVTCVAVADPEAPPSPS
APHTTTHRVVELRSPTRSRSTSSSRGRKKAQRQQASSREHKRARSGSGSRSSRSGDRSSR
SVSPAGAEDQAKRHRPKARSRRSSSDRSSSHERAKRKKAKAKSRERRRGSWGRGRRRSRS
RSCSPGSSSHEHREGRRRKRRRSGSRSRGREGSPPSSLERGRRPRHPRERRERLDKEGGV
RPRDRRGSRERRKRRSRSPSLEHRPREHRRPRSREKRPRPRARSPDKKLAPKEASPVPPP
QGEPGPDREHPARPPASAGPEASLEGPEPDPAPPKAPPVQEVPAECAPEDLDYGDSVEAG
HLFEDFSSEAVFMQLEDMSSPPSPESTDSSPERCPLPRPAPPASQQPDTSLAMAVIRREV
SLIHGEDAGPPLPQTEVAPEKHSLQPDTAEATAGPGAPGGQPAGGVLVGKEEGPSQSPLL
RARALVKRVTWNLQEAEGGAPAEDRGLRTPLHRPQKPREAVQETEAGGPAAALQQAAFSE
PPPPGHALPEPGFPDADPSQVYSPSLPPAAALPSSVPPYAPVSQPAVHFILQGSLPLTGG
GVAQSLAPVPTILTTASEPAGHAAAAATATATNNSEERTAAPRPASEKARNEEYMKKLHV
QERAVEEVKLAIKPFYQKREVTKDEYKDILRKAVQKICHSKSGEINPVKVGNLVRAYVDK
YRHMRRHRRPEAGEEPPAQGAEG
Download sequence
Identical sequences I3LU11
ENSSSCP00000027610 XP_005652844.1.46622 XP_005652845.1.46622 XP_005652846.1.46622 ENSSSCP00000027610

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]