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Domain assignment for ENSSSCP00000028656 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000028656
Domain Number 1 Region: 294-481
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.75e-51
Family SPRY domain 0.000027
Further Details:      
 
Domain Number 2 Region: 4-88
Classification Level Classification E-value
Superfamily RING/U-box 2.52e-28
Family RING finger domain, C3HC4 0.0068
Further Details:      
 
Domain Number 3 Region: 90-152
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 6.72e-18
Family B-box zinc-binding domain 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000028656   Gene: ENSSSCG00000014672   Transcript: ENSSSCT00000034639
Sequence length 487
Comment pep:known chromosome:Sscrofa10.2:9:4689813:4697012:1 gene:ENSSSCG00000014672 transcript:ENSSSCT00000034639 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTSAVLVDIQEEVTCPLCLELLTDPLSIDCGHSFCQACITQNSEEWRMDQGGESSCPVCQ
TRYRPGNLRPNRHLANIAERLREVVLGSGTQLKVILCAHHGEKLQLFCREDGQLICWLCE
RAQEHRGHHTFLMEEVAQEYQERFQESLKKLRQEQQEAEKLAALIREKRASWKNQMEPER
HRIQKQFDQLRSILDKEEQRQLRKLEEEERKGLSVIAEAEGELLQQSQSLRELISDLERR
CQGSMTELLQDVRDVAERSEFWTLKKPEALPTKLKSVFRAPDLKKMLRVFRELTDVQSYW
VDVTLNPHTANLNLVLSKNRRQVRFVGAQQSGSRLDEHYGCGVLGSRHFSSGKHYWEVDV
AKKTDWILGVCSDAMAPTFSFSQFAAGRNVYSRYQPQSGYWVIGLHRKHEYRAYEDSSAS
LLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGFPIYTFSKYYFPSTLCPYFNPCNCVVPM
TLRRPSS
Download sequence
Identical sequences XP_020918019.1.46622 ENSSSCP00000028656

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