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Domain assignment for ENSSSCP00000029407 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000029407
Domain Number 1 Region: 216-281
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.00000000000127
Family Eukaryotic type KH-domain (KH-domain type I) 0.0000219
Further Details:      
 
Domain Number 2 Region: 285-322
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.000000116
Family Eukaryotic type KH-domain (KH-domain type I) 0.0033
Further Details:      
 
Weak hits

Sequence:  ENSSSCP00000029407
Domain Number - Region: 61-116
Classification Level Classification E-value
Superfamily Chromo domain-like 0.0632
Family Chromo barrel domain 0.085
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000029407   Gene: ENSSSCG00000012727   Transcript: ENSSSCT00000036178
Sequence length 590
Comment pep:novel chromosome:Sscrofa10.2:X:137792899:137829679:1 gene:ENSSSCG00000012727 transcript:ENSSSCT00000036178 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPVGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLDVPEDLRQMCAKESAHKDFKKAVGAFSVTYDPEGYQLVILSINEVTSKR
AHMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPSSNSRVGPTPSEEKKHIDIKE
NSTHFSQPNSTKVQRVLVVSSVVAGESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYH
LNYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKGYVTDDGQGMGRGSRPYRNRG
HGRRGPGYTSAPTEEERENFLRRGDGRRRGGGGRGQGGRGRGGGFKGNDDHSRTDNRSRN
PREAKGRTADGSLQNTSSEGNRLRTGKDRNQKKEKPDSVDGQQPLVNGVP
Download sequence
Identical sequences XP_005674016.1.46622 ENSSSCP00000029407

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