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Domain assignment for ENSSSCP00000030234 from Sus scrofa 76_10.2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSSCP00000030234
Domain Number 1 Region: 255-306
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000288
Family TSP-1 type 1 repeat 0.00054
Further Details:      
 
Domain Number 2 Region: 135-184
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000000000484
Family TSP-1 type 1 repeat 0.00047
Further Details:      
 
Domain Number 3 Region: 74-130
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000157
Family TSP-1 type 1 repeat 0.0023
Further Details:      
 
Domain Number 4 Region: 187-247
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.00000000549
Family TSP-1 type 1 repeat 0.00079
Further Details:      
 
Domain Number 5 Region: 309-369
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.000000116
Family TSP-1 type 1 repeat 0.001
Further Details:      
 
Domain Number 6 Region: 380-413
Classification Level Classification E-value
Superfamily TSP-1 type 1 repeat 0.0000275
Family TSP-1 type 1 repeat 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSSCP00000030234   Gene: ENSSSCG00000012278   Transcript: ENSSSCT00000036027
Sequence length 463
Comment pep:known_by_projection chromosome:Sscrofa10.2:X:47326179:47332886:1 gene:ENSSSCG00000012278 transcript:ENSSSCT00000036027 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPTQRQAPQLLLLPLLLLTLPATGSDPVLCFTQYEESSGKCKGLLGGGVSLEDCCLNADY
AFQETSSKFCMPCRPPQWSPWSAWAPCSVTCTEGSQLRHRRCVGWGGQCPENVELGTLQW
QLQACENQPCCPEMGGWSSWGPWAPCSATCSRGTRTRRRACDRPTPKCGGHCPGEAQESE
DCDTQQVCPTHGAWAAWGPWGPCQSTCKGGPSEPVERRKRTCTAPEPSTKPPGNPCSGSA
NDQRMCSGLPPCPVAGGWGPWGAVSPCPVTCGLGQTREQRSCDHPVPQHGGPFCVGEAFR
THICNTAVPCPVDGEWGLWGEWSNCVRRGIKHISCQEIPGQQTRSRICKGRKFDGRRCLG
EQQDIRHCYSIQRCPLKEASWSEWSTWGLCIPPCGPSPVRTRQRLCQPKLPNFPPTITPV
EGQGEKNVTFWGKPLVKCDVLQGQHMMVEEKRPCLHAPPCNEP
Download sequence
Identical sequences A0A0B8RZN8 F1RWV1
ENSSSCP00000030234 ENSSSCP00000029588 XP_003135101.1.46622

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