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Domain assignment for ABAK02000001|CDS_3628228-3627371 from The Salmonella enterica Pan-genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ABAK02000001|CDS_3628228-3627371
Domain Number 1 Region: 180-279
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain 2.35e-28
Family Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.00011
Further Details:      
 
Domain Number 2 Region: 28-112
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region 3.92e-18
Family Mechanosensitive channel protein MscS (YggB), transmembrane region 0.0000676
Further Details:      
 
Domain Number 3 Region: 114-179
Classification Level Classification E-value
Superfamily Sm-like ribonucleoproteins 0.00000000000000206
Family Mechanosensitive channel protein MscS (YggB), middle domain 0.00012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) ABAK02000001|CDS_3628228-3627371
Sequence length 285
Comment /sourcefile="Salmonella_annika.proteins.fsa.dir/19457.proteins.fsa" /gene_family="885" /family_size="57" /organism="S. enterica Kentucky str. CVM29188"
Sequence
MEGFELFPKIKGAIKWMAEHSDSVIHFGWNVVAAIILLFIGKLIARLLSRGLEKLLLRRQ
VDATIVHFFSALVRYITIAFTAVAALGRIGIETSSIIAVIGAAGLAIGLALQGSLSNFAA
GVLLVSLRPFRAGEIVQIGLVIGTVEKVHIFSTTLLTADSKEVVIPNGKIIADNIINYSR
HPYRRIDLIIGVDYQSRIADVKSVIHRIIEQDHRIDKTRDITVRLGELAPSSLNFYVRVW
VPNAQYWSTYYDLLENIKEAMDENGINIPYPRMDVRVENVKSITP
Download sequence
Identical sequences A0A1U7FUI0 A0A221YSQ9 A0A221Z663 A0A2D1XJC8 A0A2D1YPE1 A0A2K2Z4Q9 G5NKY1
WP_000398244.1.100007 WP_000398244.1.100266 WP_000398244.1.100432 WP_000398244.1.100438 WP_000398244.1.100521 WP_000398244.1.100707 WP_000398244.1.10074 WP_000398244.1.100773 WP_000398244.1.100944 WP_000398244.1.100948 WP_000398244.1.101519 WP_000398244.1.101724 WP_000398244.1.101815 WP_000398244.1.101839 WP_000398244.1.101949 WP_000398244.1.102009 WP_000398244.1.10310 WP_000398244.1.10465 WP_000398244.1.11362 WP_000398244.1.1137 WP_000398244.1.11865 WP_000398244.1.11868 WP_000398244.1.11936 WP_000398244.1.12047 WP_000398244.1.12159 WP_000398244.1.12472 WP_000398244.1.12484 WP_000398244.1.13311 WP_000398244.1.13677 WP_000398244.1.13764 WP_000398244.1.13857 WP_000398244.1.14041 WP_000398244.1.14369 WP_000398244.1.1440 WP_000398244.1.14446 WP_000398244.1.14495 WP_000398244.1.14688 WP_000398244.1.14737 WP_000398244.1.14808 WP_000398244.1.14964 WP_000398244.1.15079 WP_000398244.1.15100 WP_000398244.1.15586 WP_000398244.1.15835 WP_000398244.1.15909 WP_000398244.1.1592 WP_000398244.1.16000 WP_000398244.1.1601 WP_000398244.1.16032 WP_000398244.1.16565 WP_000398244.1.16581 WP_000398244.1.1668 WP_000398244.1.16846 WP_000398244.1.1737 WP_000398244.1.17439 WP_000398244.1.1749 WP_000398244.1.17560 WP_000398244.1.17703 WP_000398244.1.17901 WP_000398244.1.17919 WP_000398244.1.18089 WP_000398244.1.18192 WP_000398244.1.18249 WP_000398244.1.19030 WP_000398244.1.19291 WP_000398244.1.19357 WP_000398244.1.19723 WP_000398244.1.1990 WP_000398244.1.20023 WP_000398244.1.20631 WP_000398244.1.20700 WP_000398244.1.2091 WP_000398244.1.21089 WP_000398244.1.21286 WP_000398244.1.21309 WP_000398244.1.21326 WP_000398244.1.21399 WP_000398244.1.21443 WP_000398244.1.21692 WP_000398244.1.21910 WP_000398244.1.21981 WP_000398244.1.22030 WP_000398244.1.22169 WP_000398244.1.22205 WP_000398244.1.22337 WP_000398244.1.22565 WP_000398244.1.22676 WP_000398244.1.22845 WP_000398244.1.23148 WP_000398244.1.23172 WP_000398244.1.23175 WP_000398244.1.23246 WP_000398244.1.23311 WP_000398244.1.23343 WP_000398244.1.2342 WP_000398244.1.23500 WP_000398244.1.237 WP_000398244.1.23720 WP_000398244.1.2376 WP_000398244.1.2380 WP_000398244.1.23819 WP_000398244.1.24376 WP_000398244.1.24392 WP_000398244.1.24419 WP_000398244.1.24555 WP_000398244.1.2467 WP_000398244.1.24686 WP_000398244.1.24839 WP_000398244.1.25064 WP_000398244.1.25700 WP_000398244.1.25703 WP_000398244.1.25932 WP_000398244.1.26892 WP_000398244.1.26924 WP_000398244.1.27342 WP_000398244.1.27513 WP_000398244.1.27535 WP_000398244.1.27616 WP_000398244.1.27679 WP_000398244.1.27776 WP_000398244.1.28073 WP_000398244.1.2825 WP_000398244.1.28393 WP_000398244.1.287 WP_000398244.1.28775 WP_000398244.1.28902 WP_000398244.1.29530 WP_000398244.1.29682 WP_000398244.1.29768 WP_000398244.1.2984 WP_000398244.1.29845 WP_000398244.1.29923 WP_000398244.1.3017 WP_000398244.1.30170 WP_000398244.1.30195 WP_000398244.1.30425 WP_000398244.1.30602 WP_000398244.1.3076 WP_000398244.1.30823 WP_000398244.1.31011 WP_000398244.1.31086 WP_000398244.1.31111 WP_000398244.1.31156 WP_000398244.1.31198 WP_000398244.1.31214 WP_000398244.1.3124 WP_000398244.1.31845 WP_000398244.1.31927 WP_000398244.1.32056 WP_000398244.1.32170 WP_000398244.1.32277 WP_000398244.1.32368 WP_000398244.1.32424 WP_000398244.1.32545 WP_000398244.1.32902 WP_000398244.1.32930 WP_000398244.1.32961 WP_000398244.1.33010 WP_000398244.1.33693 WP_000398244.1.33817 WP_000398244.1.34107 WP_000398244.1.34703 WP_000398244.1.34707 WP_000398244.1.34801 WP_000398244.1.34817 WP_000398244.1.3541 WP_000398244.1.35460 WP_000398244.1.3556 WP_000398244.1.35777 WP_000398244.1.36542 WP_000398244.1.36839 WP_000398244.1.36978 WP_000398244.1.37320 WP_000398244.1.37351 WP_000398244.1.3751 WP_000398244.1.37666 WP_000398244.1.38349 WP_000398244.1.38512 WP_000398244.1.38622 WP_000398244.1.38740 WP_000398244.1.38830 WP_000398244.1.38881 WP_000398244.1.38895 WP_000398244.1.3891 WP_000398244.1.38942 WP_000398244.1.39128 WP_000398244.1.39275 WP_000398244.1.39808 WP_000398244.1.40025 WP_000398244.1.40254 WP_000398244.1.40374 WP_000398244.1.40722 WP_000398244.1.40771 WP_000398244.1.40788 WP_000398244.1.41048 WP_000398244.1.41050 WP_000398244.1.41904 WP_000398244.1.42109 WP_000398244.1.42238 WP_000398244.1.42244 WP_000398244.1.42276 WP_000398244.1.42328 WP_000398244.1.42433 WP_000398244.1.42491 WP_000398244.1.42655 WP_000398244.1.42794 WP_000398244.1.43160 WP_000398244.1.43272 WP_000398244.1.43299 WP_000398244.1.43476 WP_000398244.1.43520 WP_000398244.1.43535 WP_000398244.1.43606 WP_000398244.1.4373 WP_000398244.1.43839 WP_000398244.1.43864 WP_000398244.1.43873 WP_000398244.1.44250 WP_000398244.1.4440 WP_000398244.1.44578 WP_000398244.1.44593 WP_000398244.1.44702 WP_000398244.1.44998 WP_000398244.1.45027 WP_000398244.1.45229 WP_000398244.1.46091 WP_000398244.1.46232 WP_000398244.1.46243 WP_000398244.1.46345 WP_000398244.1.46689 WP_000398244.1.46693 WP_000398244.1.46803 WP_000398244.1.47492 WP_000398244.1.47587 WP_000398244.1.47817 WP_000398244.1.47928 WP_000398244.1.48132 WP_000398244.1.48651 WP_000398244.1.48918 WP_000398244.1.48931 WP_000398244.1.49550 WP_000398244.1.49590 WP_000398244.1.49780 WP_000398244.1.50 WP_000398244.1.50517 WP_000398244.1.50565 WP_000398244.1.50593 WP_000398244.1.50800 WP_000398244.1.50918 WP_000398244.1.51025 WP_000398244.1.51331 WP_000398244.1.51464 WP_000398244.1.51594 WP_000398244.1.51841 WP_000398244.1.52255 WP_000398244.1.52356 WP_000398244.1.53203 WP_000398244.1.53675 WP_000398244.1.53688 WP_000398244.1.54607 WP_000398244.1.54822 WP_000398244.1.54827 WP_000398244.1.55178 WP_000398244.1.55418 WP_000398244.1.55554 WP_000398244.1.55614 WP_000398244.1.55623 WP_000398244.1.55672 WP_000398244.1.56059 WP_000398244.1.56097 WP_000398244.1.56222 WP_000398244.1.56303 WP_000398244.1.56368 WP_000398244.1.56370 WP_000398244.1.56468 WP_000398244.1.56512 WP_000398244.1.57399 WP_000398244.1.57494 WP_000398244.1.57510 WP_000398244.1.5753 WP_000398244.1.57709 WP_000398244.1.57781 WP_000398244.1.58153 WP_000398244.1.58157 WP_000398244.1.58372 WP_000398244.1.5846 WP_000398244.1.58564 WP_000398244.1.58698 WP_000398244.1.58831 WP_000398244.1.58834 WP_000398244.1.59097 WP_000398244.1.59236 WP_000398244.1.59412 WP_000398244.1.59439 WP_000398244.1.59512 WP_000398244.1.60052 WP_000398244.1.60106 WP_000398244.1.60213 WP_000398244.1.60226 WP_000398244.1.60370 WP_000398244.1.60507 WP_000398244.1.6052 WP_000398244.1.60608 WP_000398244.1.6086 WP_000398244.1.60976 WP_000398244.1.6108 WP_000398244.1.61087 WP_000398244.1.61146 WP_000398244.1.61509 WP_000398244.1.61582 WP_000398244.1.61743 WP_000398244.1.61968 WP_000398244.1.62120 WP_000398244.1.62122 WP_000398244.1.62219 WP_000398244.1.62222 WP_000398244.1.62241 WP_000398244.1.62486 WP_000398244.1.62522 WP_000398244.1.62677 WP_000398244.1.62798 WP_000398244.1.62976 WP_000398244.1.63118 WP_000398244.1.63135 WP_000398244.1.63455 WP_000398244.1.63532 WP_000398244.1.6357 WP_000398244.1.63766 WP_000398244.1.64034 WP_000398244.1.64374 WP_000398244.1.64674 WP_000398244.1.64919 WP_000398244.1.65022 WP_000398244.1.65052 WP_000398244.1.65348 WP_000398244.1.65394 WP_000398244.1.65437 WP_000398244.1.65558 WP_000398244.1.6560 WP_000398244.1.66272 WP_000398244.1.66368 WP_000398244.1.66462 WP_000398244.1.6647 WP_000398244.1.66492 WP_000398244.1.66630 WP_000398244.1.66820 WP_000398244.1.66825 WP_000398244.1.67617 WP_000398244.1.67633 WP_000398244.1.68036 WP_000398244.1.6833 WP_000398244.1.68478 WP_000398244.1.685 WP_000398244.1.68690 WP_000398244.1.68816 WP_000398244.1.68958 WP_000398244.1.69011 WP_000398244.1.69296 WP_000398244.1.69346 WP_000398244.1.69588 WP_000398244.1.69710 WP_000398244.1.69754 WP_000398244.1.69760 WP_000398244.1.70047 WP_000398244.1.7010 WP_000398244.1.70491 WP_000398244.1.70869 WP_000398244.1.70969 WP_000398244.1.71007 WP_000398244.1.71069 WP_000398244.1.71120 WP_000398244.1.7134 WP_000398244.1.71452 WP_000398244.1.71923 WP_000398244.1.72107 WP_000398244.1.72281 WP_000398244.1.72283 WP_000398244.1.72351 WP_000398244.1.72412 WP_000398244.1.7243 WP_000398244.1.72850 WP_000398244.1.72892 WP_000398244.1.72944 WP_000398244.1.73328 WP_000398244.1.73362 WP_000398244.1.73379 WP_000398244.1.7374 WP_000398244.1.7386 WP_000398244.1.74028 WP_000398244.1.74049 WP_000398244.1.74418 WP_000398244.1.7444 WP_000398244.1.74620 WP_000398244.1.74639 WP_000398244.1.74946 WP_000398244.1.75177 WP_000398244.1.75180 WP_000398244.1.75932 WP_000398244.1.76 WP_000398244.1.76164 WP_000398244.1.76434 WP_000398244.1.76471 WP_000398244.1.76532 WP_000398244.1.77431 WP_000398244.1.77436 WP_000398244.1.77440 WP_000398244.1.77575 WP_000398244.1.77629 WP_000398244.1.77754 WP_000398244.1.77971 WP_000398244.1.78259 WP_000398244.1.78715 WP_000398244.1.79081 WP_000398244.1.79203 WP_000398244.1.79427 WP_000398244.1.79466 WP_000398244.1.79645 WP_000398244.1.79867 WP_000398244.1.79892 WP_000398244.1.79914 WP_000398244.1.79945 WP_000398244.1.79951 WP_000398244.1.80293 WP_000398244.1.80479 WP_000398244.1.80480 WP_000398244.1.80638 WP_000398244.1.80725 WP_000398244.1.80819 WP_000398244.1.80868 WP_000398244.1.80927 WP_000398244.1.80973 WP_000398244.1.81067 WP_000398244.1.81231 WP_000398244.1.81409 WP_000398244.1.81548 WP_000398244.1.8168 WP_000398244.1.81743 WP_000398244.1.81746 WP_000398244.1.8196 WP_000398244.1.81965 WP_000398244.1.81977 WP_000398244.1.82037 WP_000398244.1.82258 WP_000398244.1.8236 WP_000398244.1.82369 WP_000398244.1.82584 WP_000398244.1.82636 WP_000398244.1.82843 WP_000398244.1.82867 WP_000398244.1.82908 WP_000398244.1.83128 WP_000398244.1.83221 WP_000398244.1.83252 WP_000398244.1.83301 WP_000398244.1.83382 WP_000398244.1.83516 WP_000398244.1.83710 WP_000398244.1.83739 WP_000398244.1.84475 WP_000398244.1.84711 WP_000398244.1.85014 WP_000398244.1.85094 WP_000398244.1.85147 WP_000398244.1.85192 WP_000398244.1.85433 WP_000398244.1.85742 WP_000398244.1.85864 WP_000398244.1.85943 WP_000398244.1.86017 WP_000398244.1.86389 WP_000398244.1.86634 WP_000398244.1.86699 WP_000398244.1.86744 WP_000398244.1.86807 WP_000398244.1.86860 WP_000398244.1.86902 WP_000398244.1.87143 WP_000398244.1.87148 WP_000398244.1.8722 WP_000398244.1.87283 WP_000398244.1.87493 WP_000398244.1.87584 WP_000398244.1.87626 WP_000398244.1.8767 WP_000398244.1.87999 WP_000398244.1.88620 WP_000398244.1.88624 WP_000398244.1.88651 WP_000398244.1.88698 WP_000398244.1.88845 WP_000398244.1.88942 WP_000398244.1.89174 WP_000398244.1.89462 WP_000398244.1.89632 WP_000398244.1.89647 WP_000398244.1.89777 WP_000398244.1.89815 WP_000398244.1.90084 WP_000398244.1.90211 WP_000398244.1.90409 WP_000398244.1.90792 WP_000398244.1.90876 WP_000398244.1.91049 WP_000398244.1.91107 WP_000398244.1.91580 WP_000398244.1.91736 WP_000398244.1.91880 WP_000398244.1.92044 WP_000398244.1.92375 WP_000398244.1.92562 WP_000398244.1.92758 WP_000398244.1.92926 WP_000398244.1.92988 WP_000398244.1.93322 WP_000398244.1.93604 WP_000398244.1.93691 WP_000398244.1.93803 WP_000398244.1.93837 WP_000398244.1.93956 WP_000398244.1.94039 WP_000398244.1.94070 WP_000398244.1.94379 WP_000398244.1.94383 WP_000398244.1.94562 WP_000398244.1.94982 WP_000398244.1.9503 WP_000398244.1.95094 WP_000398244.1.95320 WP_000398244.1.95805 WP_000398244.1.96590 WP_000398244.1.96640 WP_000398244.1.96758 WP_000398244.1.9686 WP_000398244.1.96917 WP_000398244.1.97480 WP_000398244.1.97626 WP_000398244.1.97628 WP_000398244.1.97693 WP_000398244.1.97768 WP_000398244.1.97873 WP_000398244.1.97983 WP_000398244.1.9805 WP_000398244.1.98438 WP_000398244.1.99219 WP_000398244.1.99255 WP_000398244.1.99327 gi|549481300|ref|YP_008615713.1| ABAK02000001|CDS_3628228-3627371 ABAN01000010|CDS_36542-37399 NZ_ACBF01000011|CDS_99513-98656

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