SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for Si004399m|PACid:19677276 from Setaria italica v164

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Si004399m|PACid:19677276
Domain Number 1 Region: 5-59
Classification Level Classification E-value
Superfamily F-box domain 0.0000366
Family F-box domain 0.0089
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Si004399m|PACid:19677276
Sequence length 407
Sequence
MAAPPPPQALSMEELPEETQRLILRHIPCSVDHGRMSLVCRAWRNMIRRQRNQLRRLLPW
LLLRAPFPVGSTRVACVLSGCRVHHFLNITPLEARCFGSHDGAWLLLDTRELRPHKALNI
RTGNVCDLPRKLRRRTDPYVHRMVIHVAALSSSPEHTNYVGAAIVTSWRNPAPSVVAALP
PRHRCVALWRKNWRWVFDFVPPGDGDVALDVEDVLYLYSGAFAFVTQGEHLRLCKPFRLQ
ENMLTTKWETLRFRPRGRLHDQYVRARYLVVSREELLMVVRFTPHPNQPTSKFKVFRGIE
RNIADADANFPVDLYPFEWSELDTLGDQMLFVGHGCSRSYKADEYLQGGIYFLDDGKFYD
DAVIFGNGNVNHYPCSDNGMWSEGGHVQRCFPRPDPLDQSAPVWLLP
Download sequence
Identical sequences K3XR59
Si004399m|PACid:19677276

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]