SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for Si008375m|PACid:19702935 from Setaria italica v164

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Si008375m|PACid:19702935
Domain Number 1 Region: 163-381
Classification Level Classification E-value
Superfamily RNI-like 0.00000000000165
Family Cyclin A/CDK2-associated p19, Skp2 0.036
Further Details:      
 
Domain Number 2 Region: 46-81
Classification Level Classification E-value
Superfamily F-box domain 0.00000353
Family F-box domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Si008375m|PACid:19702935
Sequence length 449
Sequence
MTPQAISAFIDLIPCRSKRSSKRFHRPECRMSKHIWDLVERDSLVQDLPCKILSELPLKE
VVRASVLSSRWRCVQKLNPKLRFDGTKMCSSKGICGSKQYTQEFIQNVNALNSKLVVHLD
SWVRFVVASQAKNLAIDLVPVKFPGRNDRYLLPNELLDIRTASRLQHIQLGFVSIRLPSQ
FSGFPNLRKLDLDMINVTAKDIEEMLSSCSNLEWLCIVRCHLDDELKVDLPLPCLLYLCV
AHCRITGIKFNAMKLQTFECRGGRYPLDLTQSLELKDARLDFIDSVTLDYALTTLPTVLP
SVENLILRARAPLKMSATLFLASFFRAAPLMEKLELHFSHTCVSVQTLTQSPTFAKHSKT
YLMSLPGFPHNHLKNLYITGFIACTGQLEFLQHAVENAPVLEVLTLDPALKFDEGMDYKG
RAGFFSRVREISRRYLSGRVSPTTKLCIL
Download sequence
Identical sequences K3Y2F1
Si008375m|PACid:19702935

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]