SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Si025868m|PACid:19706485 from Setaria italica v164

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Si025868m|PACid:19706485
Domain Number 1 Region: 182-441
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.59e-58
Family Extended AAA-ATPase domain 0.085
Further Details:      
 
Domain Number 2 Region: 509-716,761-967
Classification Level Classification E-value
Superfamily L domain-like 2.72e-31
Family Polygalacturonase inhibiting protein PGIP 0.069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Si025868m|PACid:19706485
Sequence length 1045
Sequence
MAAVLDAMVPYVKKLITDMAEEEVSMLLGVSGEIEKLEDNIEGIKAFLADAERRRLTDQS
VQRWVRKLKDAMYDATDIIDECHLEAADKRRGSTEDGSSVKKKGCFQPLLFCIRNPVFAH
KIGSRIKELNQRLDGIHKEADRFKFSINLGSNPEPRKLTDAERSTQNMTSEFDESAIVGE
KIEQDTRELAQLLITGGLHDIKVVSIVGTGGMGKTTLAQKIFNEVTIQDHFKVKVWLSIT
QHFNEIELLKTAIEHAGGVHGGTQDKTHLTRTLTKTLSTGRFLLVLDDVWCNQAWSHVLS
VPVKNASQKQQGNWVLITTRSEDLAQRMGTSFYQHRVSPLNEEDAWSLLTKQLPPSPNPV
VGTDYLRDVGMKIVKKCDGLPLAVKVMGGLLSMRSRSEREWEAVLNHHAWSVTGLPKELD
SRIYLSYEDLSPQQKQCFLYCSLFPKGTSISWLKVIPMWISEGFIQPHADKSSSHDDQLE
EIATEYYKELITRNLLEPQAPLTAYHCTMHDVVRSFAEFMAREESLVVEDMQVVRGSNDS
LVRRLSIGPTSLVPGLAALQKKGSVRTLFINSKMDFELSDSLNSFSMLRVLSIHGGDCDR
LVGSLCQLRHLRYLGLEGTNISRLPDNINNMKFLQHIVLTGSVHLENLPRTIIQLVHLRT
LDIFGSNDNVVIPKEFGMLRNLRILGFRVRMDMDGGWCSLEEIGPLSKLIRLSLHGLEDV
SASSLAEMARISSKEHLEYLALYWSSGCMELRDEIEKQQQQQVVEEVLEKLCPPPRIHHL
YIKGYFGRTLPNWMMVVEACAFKSLSILSLQDLPCCTKLPDGLCRIPSLKSLVIEDAPAI
KSVGSEFQASSSSSTASTSFPNLTHLSMEGLCEWEEWEWEEQTVDVTAGAMAMHALEFLK
IHKCKLSCLPPGLANNKRHALRGLYLYELSNLASVENFPSVVKLDVFDCPKLKRISGLSK
LHKIRIVRCPELEVFQGVPVLDIIVLVDATMETLPGYLACVNPRFLKLGCSKELHDSIIS
GSSSECEKISHITKLDINCIERRFR
Download sequence
Identical sequences K3ZH17
Si025866m|PACid:19706484 Si025868m|PACid:19706485 Si025869m|PACid:19706486

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]