SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for Si038930m|PACid:19685034 from Setaria italica v164

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Si038930m|PACid:19685034
Domain Number 1 Region: 30-78
Classification Level Classification E-value
Superfamily F-box domain 0.00000867
Family F-box domain 0.022
Further Details:      
 
Weak hits

Sequence:  Si038930m|PACid:19685034
Domain Number - Region: 177-295
Classification Level Classification E-value
Superfamily Quinoprotein alcohol dehydrogenase-like 0.0196
Family Quinoprotein alcohol dehydrogenase-like 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Si038930m|PACid:19685034
Sequence length 399
Sequence
MSSAKLRRRECRAGNGTTTAAASPLPPPPPPIPLDPLLEILARTDATTVVRCAATSKPVR
RAIAGPDFRHAITARRATDGGGGFDPSLLLGFSCVHRGSCTDDPARVAQQALRGNRLRFD
AGLLEAFEPVAARGGLVVLRQREAASAPKLRVCNSLTGDTTCLPPAAVQDEYPPALVAVG
DAGRSFELLIADRCLRTQTFSSKEGKWRAVVDTRLLPRHCYDVPSGNGAHPVVLGAGTII
HWLCHRCLDPGVKVLDTGTGQATQIELPPDYLTRVRYSQRLDTGFLLAASPDGRLGSMWT
LAEDDGSARWTRQVVIRRQAIARAAMEGPSYSVRFLGFGERSGAVMLQMEGVGLVQLDLG
SKEAVVLGHEFKQIGQTDLFQLCLHETDLCSLLQSMKPF
Download sequence
Identical sequences K4AJ65
Si038930m|PACid:19685034

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]