SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for symbB.v1.2.030101.t1|scaffold3351.1|size58635|3 from Symbiodinium minutum clade B1 v1.2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  symbB.v1.2.030101.t1|scaffold3351.1|size58635|3
Domain Number 1 Region: 701-919
Classification Level Classification E-value
Superfamily NagB/RpiA/CoA transferase-like 9.35e-31
Family Methenyltetrahydrofolate synthetase 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) symbB.v1.2.030101.t1|scaffold3351.1|size58635|3
Sequence length 1024
Sequence
MEARTFTVRKERDVPEHMMLEGFRWSIGLVSRLLIRTITEGSTAVMQAINQDDARRLRRA
LREAPRAERSSWQLRVRVGSQSISPLHWALRSGAHTVARTMIQDVLTIRADRDRYYYGVD
DLFRLQADVVEHILREAPILAETLLDGLIWRSHKTQDGLRPVIYYLEHLVQDMDESQMLS
RALVSFVKFKHPRTIMHPILTFVLDLLWENLAMRSFFFDRLLTVISFIVYLLATCFLNQR
ALIEKPPTKYCLVAARTLVYGMGFGRLLYWHTLQAYRSLVNKDLKKLFCLSVPRYLLHGA
EMCSFALMINMIVMLMVEPLVHCLGSTEDMIGFTCEAWTDGMSLTYAVCLVAGIFLYSIL
VLEIGNISIELSEYRVLCLHAFKQVMLCIAVVSITIFTFSFAITGMILTREATNLSGEEW
TDLGRVITTLVQLTVGLMDLGELHSVAEESPFLLIVVSLFMVVVYSFFFNLLVSQFCGVY
SSLAADIKGHARLARGETILETLKTIEWKRWKTFVTSLALDRRVDFEEGDIGLAGGIKAF
EAALEHPVSKDQIVRFGGQTDPSLPWPEHSCGEENSTEKMIQRTIQKSLQKMLGKKAVGS
IDDTSSSHPSSSHRSDIRNSFSFEAEDLSGDVAMSGTIVQIVEKTKAAKRILRALPISDP
MHESEETRLRRDQEARDRMAAHMKAVEEAEASGSTGDRGAWKWKIRQRIWDYMEENDIAA
NPRPVHHRIPNFVQAELTAKQVVKLPEFQNAKWVKVNPDRPQAEVRATVLRSGKMLLVPQ
PRLRTGFFSVLDPQKIPLEKYGYACTQAGVVEFGQPIDLDADLKVDMVIIGSVAVNPANG
ARLGKGEGFAELEYGMLRLMGAVDDDTPVVSCIHDCQLVDDIPAEKLLCHDVPVDIICTP
TQTIRVPRILPKPKGIYWDKLSPQKLGSILILQKLKAKLERETGQALPSGPDEILPPTAK
RDKGKGKSRDKGKGQSGKGKGKGSGKSKSKEGDQGVEGNQGNRFGGKGSETGPREVRRRW
QPKQ
Download sequence
Identical sequences symbB.v1.2.030101.t1|scaffold3351.1|size58635|3

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]