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Domain assignment for gi|385826116|ref|YP_005862458.1| from Lactobacillus johnsonii DPC 6026

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|385826116|ref|YP_005862458.1|
Domain Number 1 Region: 204-602
Classification Level Classification E-value
Superfamily beta-lactamase/transpeptidase-like 1.05e-92
Family beta-Lactamase/D-ala carboxypeptidase 0.000000984
Further Details:      
 
Domain Number 2 Region: 65-253
Classification Level Classification E-value
Superfamily Penicillin binding protein dimerisation domain 1.28e-45
Family Penicillin binding protein dimerisation domain 0.0000298
Further Details:      
 
Domain Number 3 Region: 661-715
Classification Level Classification E-value
Superfamily Penicillin-binding protein 2x (pbp-2x), c-terminal domain 0.0000000000196
Family Penicillin-binding protein 2x (pbp-2x), c-terminal domain 0.0035
Further Details:      
 
Domain Number 4 Region: 603-658
Classification Level Classification E-value
Superfamily Penicillin-binding protein 2x (pbp-2x), c-terminal domain 0.0000000000955
Family Penicillin-binding protein 2x (pbp-2x), c-terminal domain 0.0074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|385826116|ref|YP_005862458.1|
Sequence length 716
Comment penicillin-binding protein 2B [Lactobacillus johnsonii DPC 6026]
Sequence
MKKFNNLNRNRSKAHGYRFTVGRILQLVLALVFLVFIGRFLYIGISNQVAGENLNKRVNQ
IYRRNEVLKATRGTIYDKNGLTLAEDAHVFTVYAILDKSSIDYHNKPMYVTNKRKTAQKL
AEVLPLSEEKIYSYLTPKHKAFQVEFGSAGTGLTLSQKEKIEEMKLPGIKFIETPSRLYP
NGNFASHIIGLAQPQKNQGNSTLVGTMGIEAYFDKQLAGKDGYREAFVDAENYQLPNSQK
NARATKDGDNIYLTLDSRLQTYLEVLMSQVQDKYKPKALTAVVEDIKTGKILAASQRPTF
NPQTKKGLDTSWRNMLVQDSYEPGSVFKVLTYSSAIESGHYNPNEQYKSGAVTVQGSTIH
DWNNSGWGSIPFSQAFPRSSNVGFVKIEQKMGSKTWKEYLNKYRIGKKTGVTLPGETAGI
LNFSTPLNQAVTAFGQGVNVNAMQMMQAYSALANNGQMVKPQFVEKIVSPSGKVVEKFHR
TKVGTPIYSAKTAKTVLKGMQDVVNASYGTGAAYKMPGKSIAVKTGTAQIAGPHGGYLTG
DNNYIFSVVGVTPANNPRYCVYLTMKQPQKMSKPAETILSSIFKPIMNRLISLSDSSAKV
NEKVTVPALTGKSVEKAKEDANNAGVSVEVIGTGKNVSRQSVGAGVKEDTDTKIFLYTGG
QVTCPNMVGWSEDEVNSFMTTTDIPITINGKGKVTKQSIPAGKVIDKNSKLSVNLK
Download sequence
Identical sequences F4AFG5
WP_014567610.1.46682 gi|385826116|ref|YP_005862458.1|

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