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Domain assignment for gi|427722242|ref|YP_007069519.1| from Leptolyngbya sp. PCC 7376

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|427722242|ref|YP_007069519.1|
Domain Number 1 Region: 436-537
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), C-terminal domain 5.75e-18
Family Mechanosensitive channel protein MscS (YggB), C-terminal domain 0.0064
Further Details:      
 
Domain Number 2 Region: 371-435
Classification Level Classification E-value
Superfamily Sm-like ribonucleoproteins 0.0000000000216
Family Mechanosensitive channel protein MscS (YggB), middle domain 0.0027
Further Details:      
 
Domain Number 3 Region: 295-370
Classification Level Classification E-value
Superfamily Mechanosensitive channel protein MscS (YggB), transmembrane region 0.000000000157
Family Mechanosensitive channel protein MscS (YggB), transmembrane region 0.0075
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|427722242|ref|YP_007069519.1|
Sequence length 555
Comment mechanosensitive ion channel protein MscS [Leptolyngbya sp. PCC 7376]
Sequence
MTDLLIQFRPVGIDILTVMAQIVIFLIVIFIVRYLAFNTIERLSQWFPDTPLNPLGVTKV
VFRKGLNIIVFVGLGFIVSVNSYLFYTSESILAYMQGLVFGVPRGQWQSFGIGIFKSLLL
LLLTALIIASLRPWSERLGNRLKTSQQNEANEQSLNKLLWAVELSLETGLWLLALVICLE
FVFLPDKAIAYFYVALECYLLTCLGVICVYGIFTLIDTLNALADPYIAEHPNSLLRFYPR
FRYLIRLTKRCLEYGVFIAIGGLIFTQLPWFKPLAIYSVTINQLIAIILGTGICVELANI
SIEEFLLRHDNLDFSQRRRRLTFIPPLQNIVRYLIYFGSGVAILSVLKVDPTPVLAGAGI
VGLALSLGTQNLINDLVNGFTILLQNYYLIGDFVETDNATGVVEAMDLRVTRFRSPDGRL
HIVRNGDIKTIVNYSKEYVYAVVLVGVDYDSDLDHVYGVLTEVGKQVKELHSDVLEPTRI
DGLDNFSESELTIRTSTKVKPGRHLPVQRLVRKLIKEAFDRENVEIPFARRVLILKNDTS
ENVEKIKDVTDKLEN
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Identical sequences K9PTC1
gi|427722242|ref|YP_007069519.1| WP_015132471.1.56710

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