SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|427724651|ref|YP_007071928.1| from Leptolyngbya sp. PCC 7376

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427724651|ref|YP_007071928.1|
Domain Number 1 Region: 14-169
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 1.28e-36
Family Pentapeptide repeats 0.00018
Further Details:      
 
Domain Number 2 Region: 139-272
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 6.15e-34
Family Pentapeptide repeats 0.00061
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|427724651|ref|YP_007071928.1|
Sequence length 281
Comment pentapeptide repeat-containing protein [Leptolyngbya sp. PCC 7376]
Sequence
MDAGELLERYAAGERDFREVDLEGAFLGGARLNGINLRESSLSRVIFTGATLDQANLREA
DLSYASLQGNLSQANLISSNLTEANLTAAKMAYSGMRAANLTRAKLTSADLSYCILNEAI
MREANLSKATLVDAFIGRANLTQANLEGANLQGANLTSAILIGANLRGANLANATLHGIN
ATGSTADDADLSKSKLNSANLTNVKLRGTNLREAQLAWTTMRGADLTEAKLFRAKLYWSN
FTGANLTRTMLMDATMDQVNFRNAILDGTIFPSNMDMAKAT
Download sequence
Identical sequences K9Q1Y9
WP_015134847.1.56710 gi|427724651|ref|YP_007071928.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]