SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|427725540|ref|YP_007072817.1| from Leptolyngbya sp. PCC 7376

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427725540|ref|YP_007072817.1|
Domain Number 1 Region: 2-231,358-405
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 5.32e-80
Family Tandem AAA-ATPase domain 0.000000154
Further Details:      
 
Domain Number 2 Region: 717-935
Classification Level Classification E-value
Superfamily Helical scaffold and wing domains of SecA 2.62e-70
Family Helical scaffold and wing domains of SecA 0.00000908
Further Details:      
 
Domain Number 3 Region: 407-515,615-715
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 8.87e-51
Family Tandem AAA-ATPase domain 0.00000781
Further Details:      
 
Domain Number 4 Region: 230-358
Classification Level Classification E-value
Superfamily Pre-protein crosslinking domain of SecA 6.67e-43
Family Pre-protein crosslinking domain of SecA 0.0000597
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|427725540|ref|YP_007072817.1|
Sequence length 939
Comment protein translocase subunit secA [Leptolyngbya sp. PCC 7376]
Sequence
MFKKLFGDPNARKLKKFQPIVAEINLLAEDFEKLTDEDLARKTIEFRNKLDKSDSDEETE
EILDDILPEAFALVREAGGRVLGMRHFDVQLLGGIVLHKGQIAEMRTGEGKTLVATLPSY
LNGLTGKGVHVVTVNDYLARRDAEWMGQVHRFLGLSVGLIQNAMGPAEKIENYNCDITYT
TNSELGFDYLRDNMATAMSEVVQRPFNYCVIDEVDSILIDEARTPLIISGQVERPTEKYM
QAAEIARQLIPQEEEDGIGDYEVDEKARNVLMTDEGFAKAEQLLGVNDLYDSDNPWAHYI
FNAVKAKELFKRDVNYMVRGEEVMIVDEFTGRVMPGRRWSDGLHQAIEAQENVPIQKETQ
TLANITYQNFFLLYPKLSGMTGTAKTEETEFEKVYNLEVTIIPTNRTIARQDWSDVVYKN
EQAKWKAVAEEAAEEHKKGRPVLVGTTSVEKSEVVSNYLQELEVPHNLLNARPENVEKES
EIVAQAGRKGAVTIATNMAGRGTDIILGGNAEYMARLKMREYFMPMIVRPEDDQIVAGGR
GNGSGGGQGFDANAPKKKKKTWKTTLDIYPTELSGETEKMLKDAVKFAVSKYGEQNLTEL
EAEEKLAIASENAPTDDPVIQKLREVYKAIESTYVSLTGAEHDEVIQNGGLHVMGTERHE
SRRIDNQLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDRVAGLMNAFRVEEDMPIESKML
TGSLEGAQKKVETFYYDARKQVFEYDEVMNNQRRAIYAERRRVLEGQDLKEQVIQYAEKT
MSEIVDAYVNQDLPPEEWKLDKLLDKSKEFVYLLEDLQPSDIEDMTVPEMKTFLHEEIRK
AYDIKEHQVDQNQPGLMRQAERFFILQQIDTLWREHLQAIDALRESVGLRGYGQKDPLIE
YKQEGYEMFLEMMIDIRRNVVYSLFQFQPQKQPQQAQTA
Download sequence
Identical sequences K9Q3N9
gi|427725540|ref|YP_007072817.1| WP_015135712.1.56710

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]