SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|427725963|ref|YP_007073240.1| from Leptolyngbya sp. PCC 7376

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|427725963|ref|YP_007073240.1|
Domain Number 1 Region: 170-414
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.56e-72
Family Extended AAA-ATPase domain 0.000000026
Further Details:      
 
Domain Number 2 Region: 424-623
Classification Level Classification E-value
Superfamily FtsH protease domain-like 1.57e-69
Family FtsH protease domain-like 0.00000342
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|427725963|ref|YP_007073240.1|
Sequence length 629
Comment membrane protease FtsH catalytic subunit [Leptolyngbya sp. PCC 7376]
Sequence
MKSSWKTIVLWALPLLVIGFFVWQGAFSSNPANLSNGNTANIRMSYGRFLEYLDAGRVTS
VDLYEGGRTAIVSAVDPDLDNRAQQLRVDLPGNSPELITKLRDARVDFDSHPVSNNGAVW
GILGNLIFPVLLISALFLLFRRSSNMPGGPGQAMNFGKSKAKFMMEAETGIMFDDVAGIE
EAKEELQEVVTFLKQPEKFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISG
SEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQL
LTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVTVDTPDINGRLEILEVHARNK
KLAEEISLEVIARRTPGFSGADLANLLNEAAILTARRRKEAITMFEIDDAVDRVIAGMEG
TPLVDSKSKRLIAYHEIGHAIVGTMLKDHDPVQKVTLIPRGQAQGLTWFTPNEEQGLTTK
SELMARIAGALGGRAAEEEIFGHDEVTTGAGGDLQQVSGMARQMVTRFGMSDLGPLSLES
QQGEVFLGGGLTSRSEYSEEVASRIDDQVRVIAEQAHGIARQIVRDNREVVDRLVDLLIE
RETIGGEELRQIVSEYTEVPEKEQFVPQF
Download sequence
Identical sequences K9Q5J4
WP_015136120.1.56710 gi|427725963|ref|YP_007073240.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]