SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|384122993|ref|YP_005505613.1| from Yersinia pestis D106004

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|384122993|ref|YP_005505613.1|
Domain Number 1 Region: 66-202
Classification Level Classification E-value
Superfamily CBS-domain pair 3.79e-32
Family CBS-domain pair 0.0022
Further Details:      
 
Domain Number 2 Region: 203-289
Classification Level Classification E-value
Superfamily FAD-binding/transporter-associated domain-like 1.12e-23
Family CorC/HlyC domain-like 0.00028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|384122993|ref|YP_005505613.1|
Sequence length 292
Comment membrane protein [Yersinia pestis D106004]
Sequence
MSDDHSQNSDSPSPKKGFFTLIFNQLFHGEPKNRGDLVELIRDSEQNDLIDPDTRDMLEG
VMDIAEQRVRDIMIPRSQMVTLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAK
DLLPFMRTDSEPFSIDKVLRTAIVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVT
IEDILELIVGEIEDEYDDEEDRDVRQLSRHTYTIRALTQIEDFNEVFNTHFSDDEVDTIG
GLVMQAFGHLPARGETIEIEGYLFKVAMADSRRIIQVHVKIPDDAPQPKLEE
Download sequence
Identical sequences WP_015683979.1.21879 gi|384122993|ref|YP_005505613.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]