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Domain assignment for Tc01_g009540 from Theobroma cacao B97-61/B2 v1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Tc01_g009540
Domain Number 1 Region: 1163-1546
Classification Level Classification E-value
Superfamily ARM repeat 7.52e-37
Family Armadillo repeat 0.041
Further Details:      
 
Domain Number 2 Region: 1559-1882,1946-2020
Classification Level Classification E-value
Superfamily ARM repeat 8.35e-35
Family Plakophilin 1 helical region 0.071
Further Details:      
 
Domain Number 3 Region: 32-169,217-296,418-793,847-944
Classification Level Classification E-value
Superfamily ARM repeat 3.7e-33
Family HspBP1 domain 0.055
Further Details:      
 
Domain Number 4 Region: 2021-2140
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 0.00000000000000342
Family Synaptotagmin-like (S variant) 0.042
Further Details:      
 
Domain Number 5 Region: 1004-1138
Classification Level Classification E-value
Superfamily ARM repeat 0.00000111
Family Armadillo repeat 0.042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Tc01_g009540
Sequence length 2143
Comment Putative U-box domain-containing protein 13
Sequence
MEKNGDAKIQDSEPPTPHSVVKMGLRDRTSSMEDPDGTLASVAQCIEQLRQSSSSVQEKE
HSLRQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSGSVGVKIQAASVLGSLCKENELRV
KVLLGGCIPPLLGLLKSSSSEGQIAAAKTIYAVSQGGAKDHVGSKIFSTEGVVPVLWKLL
HNGLKTGDLVDNLLTGALKNLSSSTEGFWSATVQAGGVDILVKLLTTGQSSTQANVCFLL
ACMMMEDASVCSKVLAAEATKQLLKLIGPGNEAPVRAEAAGALKSLSAQCKEARREIANS
NGIPALITATIAPSKEFMQGEYAQALQENAMCALANISGGLSYVISSLGQSLESCSSPAQ
TADTLGALASALMIYDSKAESTRASDPLVIEQTLVNQFQPRLPFLVQERTIEALASLYGN
TILSIKLANSDAKRLLVGLITMATNEVQEELIRTLLTLCNNEGSLWRALQGREGVQLLIS
LLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSVKAKEDSALILK
NLCNHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLSALL
TSDLPESKVYVLDALRSMLSVVPFHDILRDGSAANDAIETMIKILSSTKEETQAKSASAL
AGIFETRKDLRESNIAVKTLWSVMKLLNVESENILAESCHCLAAVFLSIKENRDVAAVAR
DAMTPLVALADSSVLEVAEQAVCALANLILDTEVSETAIAEQIILPSTRVLREGTVSGKT
YAAAAIARLLHSRQIDYAITDCVNRAGTVLALVSFLESARGGSVATAEALDALAIVSRSE
GASGQIKPTWAVLAEFPKCISPIVSSIVDATPLLQDKAIEILSRLCRDQPVVLGDTVASI
SECIPSIARRVISSSNLKVKIGGTALLICAAKVNHHRVVEDLNQSNSSTHLIQSLVSMLG
SGETPLANPQVDNEDAISICRHAKEEARNGELDTGTAVISGANLAIWLLSVLACHDEKSK
IAIMEAGAVEVVTERISQRSSQYAQIDFKEDNSIWICALLLAILFQDRDIIRAHATMKSV
PVLANLVKSEVLANRYFAAQAMASLVCNGSRGTLLSVANSGAAGGLISLLGCADVDIEEL
LELSEEFALVRYPDQVALERLFRVEDIRVGATSRKAIPALVDLLKPIPDRPGAPYLALGL
LTQLAKDCPSNKIVMVESGALEALTKYLSLSPQDATEEAATDLLGILFSSAEIRRHEAAF
GAVSQLVAVLRLGGRAARYSAAKALESLFSADHIRNAETARQAVQPLVEILNTGMEKEQH
AAIAALVRLLSENPSRALAVADVEMNAVDVLCRILSSNCSMELKGDAAELCCVLFVNTRI
RSTMAAARCVEPLVSLLVTEFSPAQHSVVRALDKLVDDEQLAELVAAHGAVIPLVGLLYG
NNYMLHEAISRALVKLGKDRPACKMEMVKAGVIESILDILHEAPDFLCAAFAELLRILTN
NATIAKGPSAAKVVEPLFQLLSRPEFGPDGQHSALQVLVNILEHPHCRADYTLTSHQAIE
PLIPLLDSPAPAVQQLAAELLSHLLLEEHLQRDAVTQQVIGPLIRILGSGIHILQQRAVK
ALVSIALTCPNEIAKEGGVNELSKVILQADPSLPHALWESAASVLASILQFSSEFYLEVP
VAVLVRLLRSGSEGTVVGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAA
RLLEVLLNNVKIRETKATKTAIVPLSQYLLDPQTQAQQARLLATLALGDLFQNEALARTA
DAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSD
PETSVQAAMFVKLLFSNHTIQEYASSETVRAITASSVMLNIYPYLAAAIEKDLWATGTVN
EEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKSGSEATQEAALDALFLLRQAWSACP
AEVSRAQSVAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGN
PSVFCKLTLGNNPPRQTKVVSTGPNPEWDESFSWTFESPPKGQKLHISCKNKSKMGKSSF
GKVTIQIDRVVMLGAVAGEYTLLPESKSGPSRNLEIEFQWSNK
Download sequence
Identical sequences Tc01_g009540

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