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Domain assignment for Tc01_g038400 from Theobroma cacao B97-61/B2 v1

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  Tc01_g038400
Domain Number - Region: 1792-1915,2358-2432
Classification Level Classification E-value
Superfamily ARM repeat 0.0345
Family PBS lyase HEAT-like repeat 0.087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Tc01_g038400
Sequence length 2500
Comment Putative CCR4-NOT transcription complex subunit 1
Sequence
MLELSSTLSTHVRFLLQSLTEANADSISRELFQFIEYGIEGSILVLQTCLDCLNSHKTDA
KNLQSDQVVAAIFRHTMDKPNFCTVFCQSLRSTDISEEFLLNFSKTMQLSVSEKIGIGLA
LSDSENPDTRMCGKNFCMAQIEELHANSASFDSSEQIQNIVMFLQSSDALSKHVDSFMQM
LSLVQAKDVAQFVLTPILSDELRGANFLRNMDFFNESGENDFDALLAEMEKEMSMGDIIK
ELGYGCTVDAARCKDILSLCLPLTEMTISRILGTIAHTYVGLEDNPTAFSTFCLALGCST
SSELPPLCSWNIDVLIKTIKQLAPGTNWIRVIENLDHEGFYIPNEAAFSFFMSVYRHASQ
EPFPLHAICGSVWKNIEGQLSFLKYAVSALPEVFTFAHSLRQLAYMDAVHGHKLHLGNAN
HAWLCLDLLDILCQLAERGHTSFVRSMLDYPLKHCPEVLLLGMAHINVHIYNITYVTAYN
LLQHDVTYTVFPMIIKNALGAGVILQLWHVNPNLVLRGFVEVHNTEPDSMIRILEICQEL
KILSSVLEMIPFPSGIRLAVLASQKEVLDLENWLGGNLNTYKDVFFEECLKFLKEIQFGG
SQEFSAKPFHHTTAVLNLYLEASSTFFKVLKANTGMIASTQLLEEMERLHAMIMDSNPKL
QNGGTTDSSTSDGYGDDIEAEANSYFHQMFSGQLTIDSMVQMLARFKESSVKREQSIFEC
MIANLFEEYRFFPKYPERQLKIAAVLFGSVIKQQLVTHLTLGIALRGVLDALRKPADSKM
FLFGTKALEQFVDRLIEWPQYCNHILQISHLRATHSELVAFIERALARISSGHLESDGSN
NPSVQHQVSSQVTSGNGELNSSTIAQPGSQLSSPLKLQRHDSSLDDRNKLPATSSNDVKP
LLSSVGQPSVASLSDLQNAVSGSSMLSASPGFVRPSRGVTSTRFGSALNIETLVAAAERR
ETPIEAPASEIQDKISFIINNISAANIEAKGKEFNEILKEQYYPWFAEYMVMKRASIEPN
FHDLYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTI
GRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILALL
AEIYSMPNLKMNLKFDIEVLTFVLSTHMKTRSFFPHYCSLTHRSLVLFKNLGVDMKDITP
TSLLKDRKREIEGNPDFSNKDVGACQPQMVAEVKSGIISPLNHVELPLEVASPPNSGGHT
HLLSQVCFFSTLSPLSYAGPLRLSSGALMEDEKLAALGLSDQLPSAQGLFQATPSQSPFS
VNQLSAAIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAIKEIVAGIVQRSVSIATQT
TKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRSSLQGLNVA
SDLLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIANQLALRRKHRDPSFFDPSMY
GQGSMGVVPEALRPKPGHLSLSQQRVYEDFVRLPWQNQSGQSSHSMSAGPSSLSGDGGLT
GTFGSTSGQVTPGYASSQGNLGQLDVASEAIESTSAALLSASSIHIGSAAGLTQQTTEND
PLNASFSSTISAPELHSVDTTDAVKELGPTAQPLPSPAATDRLGSTISETSLSTRDALDK
YQIVAQKGDHAPINEPNARVPVLDCCGRCIFLSTMILMVVSLQFLDLLSRNTDLETSVTS
DSREVDIQGVISEVPEIILRCVSRDEAALAVAQKVFKGLYENASNSLNVSAHLAILAAVR
DVCKLAVKELTSWVIYSDEERKFNKDITVGLIRSELLNLAEYNVHMAKLIDGGRNKAAME
FAMSLLQTLVTDESRVISELHNLVDALAKVVPKPGSPESLQQLIEMIRNPSASAAALSSA
TAGKEDKARQSRDKKVPGHTSANRDDNSNVENLEPDPAGFKEQVSMLFAEWYQICEIPGA
NDGPCNHYIVQLHQNGLLKGDDMTERFFRIITELSVSHCLSSEVMSSGTLQSPQQAQTLS
FLAIDIYAKLVLSILKYCPVEQGSSKLFLMSKILTVTLRFIQKDAEDKKASFNPRPYFRL
FINWLSDLGCLDPVTDGASFQILIAFANAFHALQPLKVPAFSFAWLELVSHRSFMPKLLT
GNAQKGWAYIQRLLVDLLQFLEPFLRNAELGVPVQCLYKGTLRVLLVLLHDFPEFLCDYH
FTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIREPPRILSEVDAALKA
KQMKADVDEYLKTRPQGGSSFLTELKQRLLLSPSEAASAGTHYNVPLINSLVLYVGMQAI
QQLQSRGSHAQSTGNTVPLSVFLVSAALDIFQSLIGELDTEGRYLFLNAIANQLRYPNNH
THYFSFILLYLFAESNQEIIQEQITRVLLERLIVNKPHPWGLLITFIELIKNPRYNFWNR
SFIRCAPEIEKLFESVARSCGGLKPVDESMVSGWVSDSAH
Download sequence
Identical sequences Tc01_g038400

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