SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|473832136|ref|YP_007684434.1| from Clavibacter michiganensis subsp. nebraskensis NCPPB 2581

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|473832136|ref|YP_007684434.1|
Domain Number 1 Region: 60-294,346-375
Classification Level Classification E-value
Superfamily (Trans)glycosidases 1.76e-35
Family Type II chitinase 0.0022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|473832136|ref|YP_007684434.1|
Sequence length 378
Comment glycosyl hydrolase, family 18 [Clavibacter michiganensis subsp. nebraskensis NCPPB 2581]
Sequence
MTRLLHMRGADGGSTGRPRRPGPGVVAPYARPMTPTRPTCPPRPHLERARRLVGVAVGAA
AVLAVVVGSLPAVATAPFEVVGYAEGGSTPVSRLDASAAALTSVVVDGVNVTSDGRSVAS
PSPEALALLRQAHARGERVELLVGNYDEALGDFSPGIADALLGSPANVDRVVAQLAAEVR
KRGWDGVTVDLETLSGAHPAGLTRLVSGLKAALGSGRSVSVCLMATTDDPRPPGYDLPAL
GRAADHVVLMAYDQHGPTWSAAGPVGGMPWVKAALRPLLAAVPAARIQLGIAGYGYTWPR
TGEGRQLSDQAARDLVASQRRTAVWSVPQQEWRATLRDGTVVWWSDARSYDARVALARQL
GLGGVAVWSLGLSDPLTR
Download sequence
Identical sequences M5B5X3
WP_015488889.1.38469 WP_015488889.1.57954 WP_015488889.1.98982 gi|473832136|ref|YP_007684434.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]