SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for AMSG_12221T0 from Thecamonas trahens ATCC 50062

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  AMSG_12221T0
Domain Number 1 Region: 276-502
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.84e-67
Family Tandem AAA-ATPase domain 0.0000494
Further Details:      
 
Domain Number 2 Region: 438-648
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 4.79e-47
Family Tandem AAA-ATPase domain 0.00076
Further Details:      
 
Domain Number 3 Region: 933-1020
Classification Level Classification E-value
Superfamily Translation proteins SH3-like domain 0.00000000132
Family Ribosomal protein L14e 0.069
Further Details:      
 
Weak hits

Sequence:  AMSG_12221T0
Domain Number - Region: 857-915
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.0228
Family Eukaryotic type KH-domain (KH-domain type I) 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) AMSG_12221T0
Sequence length 1066
Comment | AMSG_12221 | Thecamonas trahens ATCC 50062 hypothetical protein (1067 aa)
Sequence
MSDDEARARRRAKLAEWKAAQAAGKGSTGATTAGTAAAAAAPAAAAAAAAAAAAVAGTVS
GGDASLPATTKTAAEPVAMDTSTSTTSRMGVLVGVPAGASSATGAFNVSLGGGRKKRKRT
NSLFAALPPLRPSKKNKSVAMAKMGSAVSRLSGNSITASQKAEAEAAAALARGEAVTLSQ
APEPADLAASSASGGTRLFERETEVPELPEFSSILDEQNLTRGGKKAIPKEAPAAHAAAA
VATAAARPIRKSFYVEVPAIAAMTKDEVRAWRAEHGPITVRGRKVPRPILRFSQAGLPAA
LHTAMDKAGFVEPTPIQAQAIPAAMMGRDLLCIAATGSGKTLAFVLPMLRHVADQPRTRA
GEGPIGIIIAPARELCTQLYVVVRSLAKKLGLTSVCAFGGSNIQPQIAAVRAGVDIIVAT
PGRLLDLISLNSGRFVDLSRVSYVVLDEADRLLDMGFSTQIERLLSGTRPDRQTIMCSAT
FPRVMERAAKTFLTAPLQIVVGARAKVADTVEQKLVIVQSDAGRLDALLVLLDSAVGDDQ
VLIFVDTRDAADALLRALIDREYVAAALHAGMDQGDRLDAISSFKAGALPILIATGVATR
GLDVKGLPFVINYHVPNHYEEYQQRVGRTGRAGASGTAYTLVSKADDDLYAPILVKALTR
SELPIPSELTAMAQSFEAKKEAGLVKTYGLAGYSGRGLPSRSGGVSAATKAAVAKAAADG
ASLEQLRALALDAMAEQAAAGSRARANSDDAELELDFDIVTLADKLYADGLKLASNAKAG
KALSAMDLVAVALARLARTSGSGIHAAASIANVTAADAQPGGDVPPVANNGNLFAIELEI
NDYSKDARWVVSRHGGLNDILDETDTAITVRGTYVAPGRKPKDGDRKLYALIEGKDRLNV
VRAWRLIRDKVEDVSRRSAREGNMDVGKYRILLKTSKVVIVLAGRFAGSKAVIVNSHPEG
TKAHPFPHAVVVGLAKYPGKVTRSMSRKRLASKTRLRTFVKVINFNHLMPTRYSLDVDFQ
PIVTRGTVVGEDVVTAKAQAIKETSSMLRAKLLAGKHKWFFTKLRF
Download sequence
Identical sequences A0A0L0DKJ9
AMSG_12221T0 XP_013755007.1.50528

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]