SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|472406033|ref|YP_007653138.1| from Lactobacillus brevis KB290

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|472406033|ref|YP_007653138.1|
Domain Number 1 Region: 35-304
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 7.06e-65
Family Phosphate binding protein-like 0.0000118
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|472406033|ref|YP_007653138.1|
Sequence length 310
Comment Glycine betaine/carnitine/choline-binding protein [Lactobacillus brevis KB290]
Sequence
MRKHLRKWLAGLLAAVILLPLGGCSLPGLAGSGNDTIRIASQNTTEQQIMAYMIAGMIEH
DTNLKTSIINNLGSGNVSFNALKNGNADISAIRFYGTDLTTILNEKFERDPAKVKATVTK
EFQDRYHMTYFKTYGFADTYAWMVTQKYAKQHHLKTVSDMKKLAPKMKVGIDQIWQNRQG
DGYPSFQKMYGYSFGTVYPMQTGLLYDALSANKMDAILGYSTDGRVASYHLKLLKDDKHF
FPPYDASPVATNAILKKHPELKPVLEKLEGKISLKTMQELNYKVDDELEEPQTVAMNYLK
QHHYFEGGNN
Download sequence
Identical sequences M5AAW2
gi|472406033|ref|YP_007653138.1| WP_015473183.1.67033

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]