SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|336122096|ref|YP_004576871.1| from Methanothermococcus okinawensis IH1

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  gi|336122096|ref|YP_004576871.1|
Domain Number 1 Region: 8-156
Classification Level Classification E-value
Superfamily Ribosomal protein S5 domain 2-like 0.00000000000000205
Family GHMP Kinase, N-terminal domain 0.0024
Further Details:      
Weak hits

Sequence:  gi|336122096|ref|YP_004576871.1|
Domain Number - Region: 270-319
Classification Level Classification E-value
Superfamily GHMP Kinase, C-terminal domain 0.00623
Family 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE 0.047
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|336122096|ref|YP_004576871.1|
Sequence length 336
Comment beta-ribofuranosylaminobenzene 5'-phosphate synthase [Methanothermococcus okinawensis IH1]
Download sequence
Identical sequences F8ANV2
WP_013867277.1.9613 gi|336122096|ref|YP_004576871.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]