SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ONIVA07G26110.2 from Oryza nivara 22

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ONIVA07G26110.2
Domain Number 1 Region: 360-463
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.01e-21
Family B3 DNA binding domain 0.0015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) ONIVA07G26110.2
Sequence length 949
Comment pep:novel chromosome:AWHD00000000:7:23757453:23763430:-1 gene:ONIVA07G26110 transcript:ONIVA07G26110.2 description:""
Sequence
MAGMAAAAAALVAAKRCMNAACGAPAPSPAGGEWRKGWPLRSGGFAVLCDKCGLAYEQLV
FCDIFHQKESGWRDCSFCGKRLHCGCIASKNSFDLLDSGGVQCVTCIKNSAVQSVPSPVV
PKLFSSQNNQRLFGKSDDLLSGRPLETSSLMVDARNDDLTIIAKNNLPFMVKNVEAGQSS
NILRQKELENGARQIKWELPTLSIGDMGRIPFLTRSQSALESRRDENKDPTTESTTSESL
SEACLNMSLGIASNGNKLEATSTVERPMLSPTTGFPEGRELTTALSPFQHAQRARHFLTR
PPRVGEGAVFDPTKDMLPHLRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIV
PLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGRPLTIQDAKGKEWHFQFRFWPNN
NSRMYVLEGVTPCIQSLQLQAGDTVTFSRIEPGGKLVMGFRKATNTVSLPDSQISAIANG
SILGDTLFSSTNENLAIVSGYSGFLQSIKGAADLHTSSIYDHHVNSADGDVSWLKTDKFG
SRPDEGSLQFLKRGRNIGSKSRRLSMDAEEAWELKLYWDEVQELLRPAPTAKPTVVMIED
YEIEEYDEPPVFAKRSIFTIRSTGEQDQWIQCDDCSKWRRLPLNVIVASKWTCADNTIDS
KSCSCSAPEELTPKELHIVLQQYEDMRRRRNSFGFKQNIPEMDAVSLDAFATAAVYGDVG
NQGSPSVATTTKHPRHRAGCTCIVCIQPPSGKGPKHNPACTCNVCMTVRRRFKTLMMRKK
QRQSEREEAEASKKIAWMNRDEPEGSSLSRSPQTVDTTRDGDVTMFDKVDINKGHIDLNF
HPTAVRDEERHGGQPRVSMVSLLEVANRPLENYMKQNGLTSLAGEQGSSSTCTGAATVPQ
PALVESEERTSNNDGGRVATAEQPESMAVDEAGDNQPDKAAGDSAAALA
Download sequence
Identical sequences A0A0E0I5Q8
ONIVA07G26110.2

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]