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Domain assignment for gi|301627452|gb|XP_002942891| from Xenopus (Silurana) tropicalis v7.1 (annotation v7.2)

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|301627452|gb|XP_002942891|
Domain Number 1 Region: 399-661
Classification Level Classification E-value
Superfamily YWTD domain 9.94e-55
Family YWTD domain 0.00000000281
Further Details:      
 
Domain Number 2 Region: 144-185
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000055
Family LDL receptor-like module 0.00048
Further Details:      
 
Domain Number 3 Region: 27-65
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000576
Family LDL receptor-like module 0.00023
Further Details:      
 
Domain Number 4 Region: 195-232
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000877
Family LDL receptor-like module 0.00034
Further Details:      
 
Domain Number 5 Region: 314-392,662-713
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000282
Family Growth factor receptor domain 0.02
Further Details:      
 
Domain Number 6 Region: 64-107
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000038
Family LDL receptor-like module 0.00038
Further Details:      
 
Domain Number 7 Region: 234-271
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000102
Family LDL receptor-like module 0.00017
Further Details:      
 
Domain Number 8 Region: 109-146
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000327
Family LDL receptor-like module 0.00058
Further Details:      
 
Domain Number 9 Region: 275-310
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000131
Family LDL receptor-like module 0.00029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|301627452|gb|XP_002942891|
Sequence length 894
Comment PREDICTED: low-density lipoprotein receptor 1-like [Xenopus (Silurana) tropicalis]
Sequence
mmkpallpasfllllglchvsaisevrkcdrsefqcgdgkcipykwicdgsaeckdgsde
spetckvvtcgadhfscggrlnrcipllwkcdgqtdcengsdendctrkvcaddqftcrs
gkcisldfvcdedldcddgsdesycpaptcnpamfqckdkgicipklwacdgdpdcedgs
deqhcegrepiktdkpcsplefhcgsgecihmswkcdggydckdksdekdcvkptcrpde
fqcndgtcihgsrqcdreydckdlsdeegcvnvtkcegpdvfkcrsgecitmdkvcnkkr
dcrdwsdepikecgenecmrnnggcahicndlkigyeclcnegyrlvdkkrcedinecen
pntcsqicinldggykcecregyqmdpvtascksigtvaylfftnrhevrkmtldrseyt
sfiprlknvvaldmeiasnkiywsdltqrkiysasmdkadntshhetvissqiqapdgia
vdwihgniywtdskfstisvantegskrktlfsddlakprdivvdpsqgfmywtdwglpa
kiekgglngvdryplvteniewpngitldltnqrlywvdsklhslscidvtgqnritvis
dethlahpfgltvfedlvfwtdieneaifsanrltgsnitkvaedllspedivlyhnlrq
pkaenwceshhlgnggceylclpaplitsrspkftcacpdgmhlgadmrscvkepvlpet
stttttsapvttttttrpttrsttlakitsttstvapqrpkmasttvapprpttespktt
qrmvtervpdrttwepvthsqlagnkfanegvvesarshptalyivlpivilclvafggf
llwknwrlkntnsinfdnpvyqktteedqihigrsqdgytypsrqmvsleddia
Download sequence
Identical sequences XP_002942891.1.99540 gi|301627452|gb|XP_002942891|

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