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Domain assignment for Lus10001187|PACid:23170265 from Linum usitatissimum v200

Domain architecture


Domain assignment details

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Strong hits

Sequence:  Lus10001187|PACid:23170265
Domain Number 1 Region: 629-725
Classification Level Classification E-value
Superfamily YhbY-like 4.32e-22
Family YhbY-like 0.003
Further Details:      
 
Domain Number 2 Region: 209-299
Classification Level Classification E-value
Superfamily YhbY-like 2.49e-20
Family YhbY-like 0.0043
Further Details:      
 
Domain Number 3 Region: 417-508
Classification Level Classification E-value
Superfamily YhbY-like 8.63e-17
Family YhbY-like 0.008
Further Details:      
 
Domain Number 4 Region: 1004-1130,1198-1228,1290-1363
Classification Level Classification E-value
Superfamily TPR-like 0.00000854
Family Tetratricopeptide repeat (TPR) 0.023
Further Details:      
 
Weak hits

Sequence:  Lus10001187|PACid:23170265
Domain Number - Region: 758-1065
Classification Level Classification E-value
Superfamily TPR-like 0.0022
Family Tetratricopeptide repeat (TPR) 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Lus10001187|PACid:23170265
Sequence length 1382
Sequence
MFLVPTVCSTKLHQSTHLHFFRYSSCSIYIKTQTFYVTSRGESYPLNKIALSPQNCSSSL
NFSTGSWLSEWNRPKKDSRPKPPKTISAYTSDENLDGRIVRGSTMKRIVQKLRRHGYVND
ENNSGNEMKERAPERVIEKGSLKDIFHVEKGMLPNAQGGFSKESPLGIESVFKNDGEIRF
PWDKPKKEEVEKGRWTAEKKSRTFFAELTLPQSELRRLRNLTHQTKSKTRIKGSRITQEI
VDVIREKWTSSEIVKIKVEGTSALNMRRMHEILEKKTGGIVIWRSGSSISLYRGASYEVP
VVKQRRLFSKTERSINHLQPVVSNRLAFPSNGIENEVQTPLPNSDIMADHEKEPVPEIPS
ETSYETEVDKLLDGLGPRYAEWPGCDPVPVDADMLPAIVPGYEPPFRILPYGVRSSLGHK
EATSLRRLARFLPPHFALGRTRNLQGLAVAMIKLWNKSSVAKIALKRGVQLTTSERMAEH
IKKLTGGILLSRNKDCLVFYRGKNFLSPDVSEALMEREMLAKSLQDEEEQARLRASAFVI
LSDHRTEPVGTAGTLEETLDANSRWGTRLDDLHKAKIIKEAEVVGHTNIARKLERKLAFA
ERRLMKAEQTLSKVEEYLKPSDRQADPESITDEERFMFRKLGLKMKAFLLLGRRGIFDGT
VENMHLHWKYRELVKIMFKAKSFDEVRKIALGLEAESGGVLVSVDKVSKGYAIIVYRGKD
YKRPSSLRPKNLLTKRKALARSIEIQRREALLKHVSALQTKVETLRAEMEQLGTVKDHGD
EQLYYRLDASYPTDGDDESDDSEEEGDESYLDLYDSDGELDYDTGGDAKERIHEETNFPY
TMQNQYEPHSNSGSEQIHAHFLKTILKPLQPQRLPCFLTTLLQLPGCNLTYAHQLFDEIP
RCRDQFLWTSLIRYHVRHRHCSDAIAFYSRMHRIGVPPSRFTFSSVLNACARVLAVSEGK
QVHNRLLQSGHLNNKIVQTTLLDMYAKCGCLADASTIFDGMIHKDIIAFTAIICGYTKLN
RMNEAQCLFDTMEEHNVVSWTTMVAGYANCGNMEAARGLYDQMPEKNSVTWVSMIAGYGK
CGDVKEARNVFDSILDLDASCWAAMLACYAQNGYAKEAIEMYMEMRAAEVKITDVAMVGV
VSACTQLGDVELATTLAADIEERHIDRGVIVSNALIHMQAKCGSLDLAWKEFNAMKFKDV
VTYSTMMAALADHGKPQEALDLLKSMQDEGLRPNQVTFVSVLNACSHGGLVEEGCKSFEL
MTCVYSIKPLAEHVTCMVDLLGRAGQLRRAYNLMMMSNADDVVGDAGIWGAFHAACRVHG
NAEMGEMAARHLGEMDPEDIGNKVLLANAYAANSKWDSAEKVRKTMVEKRVKRSPGCSWI
LG
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Identical sequences Lus10001187|PACid:23170265

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