SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|283777929|ref|YP_003368684.1| from Pirellula staleyi DSM 6068

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  gi|283777929|ref|YP_003368684.1|
Domain Number - Region: 93-147
Classification Level Classification E-value
Superfamily ABC transporter transmembrane region 0.0536
Family ABC transporter transmembrane region 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|283777929|ref|YP_003368684.1|
Sequence length 318
Comment type II secretion system protein [Pirellula staleyi DSM 6068]
Sequence
MGSLLITVLTFACVSLCIVGFSNLAFDLFFRDKSRVDDRLREAFGDEMRDRAKTSPLFKD
LQQMAAGTMIDTPTLSRRVQTIIDQAGLRITSAQLTSMSLGLAILLGLATGIATLKWWIA
IPVAIAAIPLPLWVVLKLRRRRRDTLARQLPDAFDVMSRALRAGQTVPAAFQVIATDFNS
PLKEEFAHCYEQQHLGIERDVALRDLARRTSVMELQIFVVALIMHGKTGGNLAELLGNLA
LLLRKRGKLHDRIRALTGEGRMQAVVLIALPAVIFGVMYVMNREYAQVLLDRPMLLIGCG
ISQLIGALCIRKIIDIEY
Download sequence
Identical sequences D2R0F6
WP_012909089.1.69553 gi|283777929|ref|YP_003368684.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]