SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|283777979|ref|YP_003368734.1| from Pirellula staleyi DSM 6068

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|283777979|ref|YP_003368734.1|
Domain Number 1 Region: 550-706
Classification Level Classification E-value
Superfamily ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2.62e-32
Family Histidine kinase 0.0029
Further Details:      
 
Domain Number 2 Region: 300-421
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 3.14e-18
Family Heme-binding PAS domain 0.041
Further Details:      
 
Domain Number 3 Region: 478-548
Classification Level Classification E-value
Superfamily Homodimeric domain of signal transducing histidine kinase 0.00000000353
Family Homodimeric domain of signal transducing histidine kinase 0.0043
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|283777979|ref|YP_003368734.1|
Sequence length 739
Comment PAS/PAC sensor signal transduction histidine kinase [Pirellula staleyi DSM 6068]
Sequence
MVSQLFTLKSLLCFVVTFACLEGGAELGQLLSFPPRDFATCWPPSGIIVGLLAFAPRRCW
PAMLIGAVAGNLFHNWRMNIGFETNVVFTCANFLEVSLGGYLLQRLFGQPFLLNSISRVL
TLVLLVGLGCTTLSAFLGATMVNQSGTMTEYWREWFLWWAADVVGVVLFVPITLAVLELP
QNIHRFDIKKALEASVLFGLLTLISVVVFFYADPNDSPLRFPFYTFPLLAWAGLSFGRSG
GALATIIVGVCGTWATTRGLSVFASHHAPVTSQVLVLQAFLIVTMLTSLLFSVMFESLTT
ARNELQSTNNLLSAIMEGTSDGAFVKDASGRYLLLNSAGARNFGRPMEEVIGKTDHELLP
REMADFVRNRDLKILTSGVVTTTEDTVSFGEQPRTFLTTKGPYRDARGNVIGLAGISADI
TSLKEAEEKLRRANETLETRVTERTMELTTANLQLMKEMTERSRVELRLREQQAELAHVA
RVAALGEMAAGLAHELNQPLHAISNYARGVVRRIDSARSTPADLREALAEIVAESDRAAA
IIRRVSSFVSKRPYARHPLLIDDLIRNVSTLMTAEANRRHSRLELTLGASSSWVLGDAVQ
LEQVLVNLVRNGLEAMETTPEPARLLQIESSLVGDKVMVEVRDQGCGVPDGLETKLYDAF
FTTKSHGLGMGLAISRSIVEAHEGELSSSPRLPRGTTFRFLIPVHDENQAAENDSDLSDD
SSSVAPPATPNTTIVSTTN
Download sequence
Identical sequences D2R189
gi|283777979|ref|YP_003368734.1| WP_012909139.1.69553

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]