SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|283781072|ref|YP_003371827.1| from Pirellula staleyi DSM 6068

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|283781072|ref|YP_003371827.1|
Domain Number 1 Region: 289-456
Classification Level Classification E-value
Superfamily ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 2.62e-47
Family Histidine kinase 0.00063
Further Details:      
 
Domain Number 2 Region: 218-300
Classification Level Classification E-value
Superfamily Homodimeric domain of signal transducing histidine kinase 1.31e-18
Family Homodimeric domain of signal transducing histidine kinase 0.0007
Further Details:      
 
Domain Number 3 Region: 109-224
Classification Level Classification E-value
Superfamily PYP-like sensor domain (PAS domain) 0.0000000000124
Family N-terminal PAS domain of Pas kinase 0.078
Further Details:      
 
Weak hits

Sequence:  gi|283781072|ref|YP_003371827.1|
Domain Number - Region: 62-109
Classification Level Classification E-value
Superfamily HAMP domain-like 0.0112
Family HAMP domain 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|283781072|ref|YP_003371827.1|
Sequence length 461
Comment PAS/PAC sensor signal transduction histidine kinase [Pirellula staleyi DSM 6068]
Sequence
MRLITRFRRWLILQVVVLLIAALISSAVLAKQPAATHVALWSLVTIAIVAMGYVSYSSIE
NIVSPLALLSDSVRRSKMIDESVPLNIDPDNDLALLSDSFGQMQEKLAHRVDEVQENTER
LQTVLQSMVEGVLAVDPEHSIMLANDAARKMLDFAKSNPLGRPLLEVTRARPVFEAVNTA
FNSPGPVELEFESPGVHRRCLALHATRLPGSPCPGVMLVLRDVSELRRLENLRRELVANV
SHELKTPLAAIKAYAETLRLGAVNDPEINLTFVHRIEEQAERLHELILDILQIARVEAGQ
EAFEICDVPLHELIEECLAQFADLAQSKRVELIGPPIDQEIFVRGDEEGVRTILNNLVDN
AIKYTPADGRVTVRCTIETSAVMLEVQDTGIGIAEKDQARVFERFYRVDKARSREMGGTG
LGLSIVKHLSQALGGSVGLDSTIGKGSTFRVHLPRAMSGNK
Download sequence
Identical sequences D2QXC7
gi|283781072|ref|YP_003371827.1| WP_012912229.1.69553

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]