SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|283781517|ref|YP_003372272.1| from Pirellula staleyi DSM 6068

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|283781517|ref|YP_003372272.1|
Domain Number 1 Region: 403-648
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 2.61e-85
Family ABC transporter ATPase domain-like 0.00000159
Further Details:      
 
Domain Number 2 Region: 7-44,111-394
Classification Level Classification E-value
Superfamily ABC transporter transmembrane region 5.49e-51
Family ABC transporter transmembrane region 0.00034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) gi|283781517|ref|YP_003372272.1|
Sequence length 659
Comment ABC transporter [Pirellula staleyi DSM 6068]
Sequence
MENFLRVARLALRRRGTFALAAVTSLLVALLWGFNLGLVKPIIELTFSPHTPHAHLDSLI
HSESQRQAQLQQQIDALPQTDASNRARLLHELDDAKGWQGWLQAIVPTLKRILPDHSFKA
LVLLVGILFVATLIKDGLLVANMMLVERLSQLAVFDVRRNLFRSVLKADVADLSEDRSSG
LLSRFSTDLASLAHGLNMLLGRMLLEPLKIVACLVGAAMISWRLLVVSLLLAPLAILLVS
RLSRSIKRANRRALDDSETMLGMISEAVIGIFAVRAFGMEAYERRRLHAHNKLAYRRSMR
ITLYNALGRATIELMAVVIISLAMLAGAYLVMNQQTTILGIPIMDEPLSLGSLMAFYALL
AGVTDPARKLSEVINFLQRGYASADRIFDVLDRPVAVVQKPKAIRAIPAKPALKLENVSF
SYDGETQVLRDLSLSIAFGETVALVGPNGCGKSTLLNLLPRFYDPTEGAIKMAGLDLREL
HLPSLRKRLGVVAQSALLFDDTILANIRYGSPRATDDEVIAAAEQAFAHRFITEKLTDGY
QTVVGERGSNLSGGQRQRILLARAILRNPEFLLLDEATSQVDLESEQLIHRVLEEFRKGR
TTIMITHRVSTLALADRIVVMDGGSIIDQGTHDQLLKSCPLYLRLQQSHAAGSTRARVA
Download sequence
Identical sequences D2R047
WP_012912671.1.69553 gi|283781517|ref|YP_003372272.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]