SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|294494823|ref|YP_003541316.1| from Methanohalophilus mahii DSM 5219

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|294494823|ref|YP_003541316.1|
Domain Number 1 Region: 89-312
Classification Level Classification E-value
Superfamily Nop domain 1.96e-58
Family Nop domain 0.0000557
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|294494823|ref|YP_003541316.1|
Sequence length 317
Comment Pre-mRNA processing ribonucleoprotein, binding domain protein [Methanohalophilus mahii DSM 5219]
Sequence
MNVKTWFADIEINEDGSVAECSPCTQDVQQLAKRLLVFQADPKQIPLASFDPVKKAIECG
FVSGKTEYYSLLQQTCIAATRLKIKNSYSPDLRIIHAVEALDDIDEAANLLAERLGIWYG
EHFPEAGMLTENLAKFVAENGLRQDLPQDSQFRETALSSVGMEMDAEDGAIIKAFAADLS
SLYERRHVIESYIRKNMEQLAPNLEKVAGANLGARLISMAGGLQSLSRMPSSTIQVMGAN
QALFKHLRGKATSPKHGIIFNHPLIKNSHPKIRGKMARALASSLSIASRVDAFSGRLNPV
IKEKLDRKVLSIKEGDK
Download sequence
Identical sequences D5E920
WP_013036614.1.50250 gi|294494823|ref|YP_003541316.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]