SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for gi|302348923|ref|YP_003816561.1| from Acidilobus saccharovorans 345-15

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|302348923|ref|YP_003816561.1|
Domain Number 1 Region: 1-183
Classification Level Classification E-value
Superfamily LigT-like 6.8e-39
Family 2'-5' RNA ligase LigT 0.0025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|302348923|ref|YP_003816561.1|
Sequence length 185
Comment 2'-5' RNA ligase [Acidilobus saccharovorans 345-15]
Sequence
MRAFIAVDIDRPELVSKLKELEQELESTRVRMKLVEPENFHITLRFLGEIPDSAVSDIRS
GVLPKLRFKPFTLKLSGVGAFPSPNLARVIWVGIVQGFDELKSIRDQLDKLLKDTGIKYE
SGEEFTPHITIARLKERSNPEVAKFVLEHSSYEVGEMVVNAVRLKKSILTPRGPIYETIA
EAHVE
Download sequence
Identical sequences D9Q2J2
gi|302348923|ref|YP_003816561.1| WP_013267042.1.78912

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]