SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for AT3G19910.1 from Arabidopsis thaliana 10

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  AT3G19910.1
Domain Number 1 Region: 270-336
Classification Level Classification E-value
Superfamily RING/U-box 1.14e-19
Family RING finger domain, C3HC4 0.0054
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) AT3G19910.1
Sequence length 340
Sequence
MPMENDNGPHVGNVVVTAEQATKINETDGRLPENRQTGVVSDTGSGSERGEQGVGESAVA
VAVPVEESGSISVGELPAPRSSSARVPFTNLSQIDADLALARTLQEQERAYMMLTMNSEI
SDYGSWETGSYVYDEDEFDDPENEDEDDDEDEYETDDDPQEDGLDVNVHANEDDQEDDGN
SDIEEVAYTDDEAYARALQEAEERDMAARLSALSGLANRVVEDLEDESHTSQDAWDEMDP
DELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGDNQNGTNESCVICRLDYEDDED
LILLPCKHSYHSECINNWLKINKVCPVCSAEVSTSTSGQS
Download sequence
Identical sequences A0A178VK20 Q9LT17
AT3G19910.1 NP_566651.1.80155 AT3G19910.1 3702.AT3G19910.1-P

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]