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Domain assignment for AT5G04460.1 from Arabidopsis thaliana 10

Domain architecture


Domain assignment details

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Strong hits

Sequence:  AT5G04460.1
Domain Number 1 Region: 803-856
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000288
Family RING finger domain, C3HC4 0.013
Further Details:      
 
Weak hits

Sequence:  AT5G04460.1
Domain Number - Region: 407-491
Classification Level Classification E-value
Superfamily Phage fibre proteins 0.00863
Family Tail-associated lysozyme gp5, C-terminal domain 0.074
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) AT5G04460.1
Sequence length 863
Sequence
MTSIQPLLQKSESRDDVRAEFERGLEEFMRGHLDECISFGSCSSVHNPEDEDNEDDQLVR
RRRRSELEGDNLAESSAARRRQSQILSRWAARQAQEMITTIERRNRESELIALAGLQTVS
MLDSSFLRESQSQSPSSRRQGAASERPNTQASGILQMWRELEDEHVLNRARERVRERLRQ
QRSVESNTNLSSSIASESQLSENNGSLRDSSESENDFGSWSHDRNEHGDNNNTSSREQSP
DLGDGERERVRHIARGWMDSRINDHSSNVRQRDDNRRPEWLGDTERERVRIIREWMQMTS
QQRGGARATPREDQRSTSEADRNHDAAPQVDRVRVGLAVNHEEGQPPHVRRDLRRVRGRQ
ALLDLLMRAERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERPTVPERTPSMAS
RELLQLRERQTVSGLREGFHNGRENIVHENTSNTDNDNSNTSTNALAIAITAGNSQRVTD
ESSTSSRQGNDSPILPDNSESNLANADRDWEEDTNQRRIWQENVPVDERPNLEQTTLTQF
DGYDNTDINRDETSVSDMHREASGFADDEYRTQEAHGVWHENSSRQSDGNWPGTRSEALR
SRRVVQLRRLNRFHPPEDDNVYSMELRELLSRRSVSNLLHSGFRESLDQLIQSYAERRGH
THVDWDLHANLQTAIPDSPERDTDHQVFVRNDNQLNGINGSQLLPTPPAPPPQPIWHQDL
HHTSWSRHSMHRSEIEWEVMNDLRGDVARLQQGMSQMQRMLEACMDMQLELQRSVRQEVS
AALNRSAGDQGMSAETSEDGSRWSHVSKGTCCVCCDNHIDALLYRCGHMCTCSKCANELV
RNGGKCPLCRAPIIEVIRAYSIL
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Identical sequences F4JWA1
NP_001190224.1.80155 NP_001318480.1.80155 NP_001331156.1.80155 NP_196066.2.80155 AT5G04460.1 AT5G04460.1 AT5G04460.3 3702.AT5G04460.1-P

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