SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for AT5G35338.2 from Arabidopsis thaliana 10

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  AT5G35338.2
Domain Number 1 Region: 39-144
Classification Level Classification E-value
Superfamily DNA-binding domain 3.92e-25
Family Methyl-CpG-binding domain, MBD 0.0065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) AT5G35338.2
Sequence length 155
Sequence
MVQCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQDGTTCDTWPSI
PPIPTGWSRSVHIRSESTKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGVNRSQFS
FQIPKPLDDNYVKKRTRPVKRRKSSKDNNCEKGKK
Download sequence
Identical sequences A0A178UCL2 Q9FZP6
3702.AT5G35338.2-P AT5G35338.2 AT5G35338.2 NP_974851.1.80155

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]