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Domain assignment for AT5G51980.1 from Arabidopsis thaliana 10

Domain architecture


Domain assignment details

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Strong hits

Sequence:  AT5G51980.1
Domain Number 1 Region: 140-430
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.65e-46
Family WD40-repeat 0.00023
Further Details:      
 
Domain Number 2 Region: 109-133
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00000262
Family CCCH zinc finger 0.0044
Further Details:      
 
Weak hits

Sequence:  AT5G51980.1
Domain Number - Region: 30-54
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0471
Family CCCH zinc finger 0.0058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) AT5G51980.1
Sequence length 437
Sequence
MDFDLNGGNKRVFNRLGGGGGSTRPMAPTDTRQKVCFHWRAGRCNRSPCPYLHRELPGPG
PGQGQGPGYTNKRVAEESGFAGPSHRRGPGFNGNSSSSWGRFGGNRTVTKTEKVCNFWVD
GNCTYGDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDC
ASGQCTGVLKLGGEIGCVLSEGPWLLVGMPNLVKAWNIETNADQSLSGPVGQVYSLVVGT
DLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIKVWS
LDNLQCIQTLTDHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVL
ALCGVHDAEAKPVLLCACNDNTLRLYDLPSFTERGKIFAKQEIRAIQIGPGGIFFTGDGT
GQVKVWKWCTEPTAALP
Download sequence
Identical sequences AR3581 AT5G51980.1 NP_001318784.1.80155 NP_200011.1.80155

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